Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPO2Q9UMS6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 Z93015.1-201ENST00000451718 390 ntBASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 RPL13AP20-201ENST00000459725 609 ntBASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 MIR4525-201ENST00000580000 75 ntBASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNPO2Q9UMS6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 BRWD1P1-201ENST00000401091 371 ntBASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 FAM8A4P-201ENST00000435433 1213 ntBASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 MESTP3-201ENST00000503460 968 ntBASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 AL354989.2-201ENST00000435838 1540 ntBASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SYNPO2Q9UMS6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SYNPO2Q9UMS6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SYNPO2Q9UMS6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SYNPO2Q9UMS6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.71■□□□□ 0.42
SYNPO2Q9UMS6 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.71■□□□□ 0.42
SYNPO2Q9UMS6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.71■□□□□ 0.42
SYNPO2Q9UMS6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 REXO1L4P-201ENST00000605109 1937 ntBASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.7■□□□□ 0.42
SYNPO2Q9UMS6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms