Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 CYP2T1P-202ENST00000641596 2535 ntBASIC14.32□□□□□ -0.12
LRFN1Q9P244 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 BOLA2P3-201ENST00000404566 256 ntBASIC14.32□□□□□ -0.12
LRFN1Q9P244 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 AC022210.1-201ENST00000449856 793 ntBASIC14.32□□□□□ -0.12
LRFN1Q9P244 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 USP32P1-208ENST00000506594 1164 ntBASIC14.32□□□□□ -0.12
LRFN1Q9P244 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 RPSAP52-203ENST00000622976 1023 ntBASIC14.32□□□□□ -0.12
LRFN1Q9P244 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 AC067930.6-201ENST00000623257 4947 ntBASIC14.32□□□□□ -0.12
LRFN1Q9P244 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LRFN1Q9P244 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRFN1Q9P244 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
LRFN1Q9P244 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LRFN1Q9P244 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.31□□□□□ -0.12
LRFN1Q9P244 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.31□□□□□ -0.12
LRFN1Q9P244 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.31□□□□□ -0.12
LRFN1Q9P244 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.31□□□□□ -0.12
LRFN1Q9P244 DOC2GP-204ENST00000639052 2548 ntBASIC14.31□□□□□ -0.12
LRFN1Q9P244 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.31□□□□□ -0.12
LRFN1Q9P244 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 AC009486.1-201ENST00000569860 813 ntBASIC14.31□□□□□ -0.12
LRFN1Q9P244 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.31□□□□□ -0.12
LRFN1Q9P244 AC015910.1-201ENST00000579400 975 ntBASIC14.31□□□□□ -0.12
LRFN1Q9P244 AL022328.1-201ENST00000610050 478 ntBASIC14.31□□□□□ -0.12
LRFN1Q9P244 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.31□□□□□ -0.12
LRFN1Q9P244 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
LRFN1Q9P244 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.31□□□□□ -0.12
LRFN1Q9P244 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.31□□□□□ -0.12
LRFN1Q9P244 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LRFN1Q9P244 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LRFN1Q9P244 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRFN1Q9P244 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms