Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 EIF3FP3-201ENST00000434851 1086 ntBASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC1R1Q9NWW0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 SLC25A24P2-201ENST00000415059 510 ntBASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 FNTAP2-201ENST00000430308 634 ntBASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 AKR7A2P1-201ENST00000460134 915 ntBASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 RHOQP1-201ENST00000555758 579 ntBASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 AC244452.3-201ENST00000636814 210 ntBASIC16.02■□□□□ 0.16
HCFC1R1Q9NWW0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 KRT8P14-201ENST00000414254 1442 ntBASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HCFC1R1Q9NWW0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 MIR663B-201ENST00000408361 115 ntBASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 FAM8A4P-201ENST00000435433 1213 ntBASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 AC004898.1-201ENST00000451057 766 ntBASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC1R1Q9NWW0 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms