Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 AC103988.2-201ENST00000561804 725 ntBASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 AL132994.2-201ENST00000603120 687 ntBASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC52A1Q9NWF4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 AL160314.3-201ENST00000556041 767 ntBASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 AC100827.2-201ENST00000563214 1194 ntBASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 DUX4L46-201ENST00000566845 751 ntBASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 AC138696.2-201ENST00000607376 223 ntBASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 AC002472.3-201ENST00000640124 621 ntBASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 SHC1P1-201ENST00000425230 1745 ntBASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21.88■■□□□ 1.09
SLC52A1Q9NWF4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 PDIA3P2-201ENST00000428073 158 ntBASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 CFL1-214ENST00000534769 758 ntTSL 2 BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 AC020922.3-201ENST00000595064 547 ntBASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 ZBTB45P1-201ENST00000452761 1456 ntBASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC52A1Q9NWF4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC52A1Q9NWF4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC52A1Q9NWF4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
SLC52A1Q9NWF4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC52A1Q9NWF4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC52A1Q9NWF4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC52A1Q9NWF4 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC52A1Q9NWF4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC52A1Q9NWF4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
SLC52A1Q9NWF4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC52A1Q9NWF4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms