Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 AC005696.4-201ENST00000614400 3147 ntBASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 HERC2P9-203ENST00000528584 2947 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 KIAA0513-206ENST00000566428 7772 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 OLFML2B-201ENST00000294794 3160 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 SLC16A7-203ENST00000547379 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 AP006587.1-201ENST00000534129 1502 ntBASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 ROBO4-208ENST00000533054 3071 ntTSL 2 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 AC055811.4-201ENST00000624039 1754 ntBASIC7.82□□□□□ -1.16
CDC42SE1Q9NRR8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 CR2-203ENST00000367059 3877 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 DDB2-201ENST00000256996 1870 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 PCDHA4-204ENST00000618834 10557 ntBASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 ELMO1-201ENST00000310758 4022 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 NLGN3-205ENST00000536169 3863 ntAPPRIS ALT1 TSL 5 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms