Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 AC127383.1-201ENST00000444697 1800 ntBASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 HNRNPUP1-201ENST00000554987 333 ntBASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 LINC00628-201ENST00000628516 1289 ntBASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC68Q9H2F9 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC68Q9H2F9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.71■□□□□ 0.1
CCDC68Q9H2F9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC68Q9H2F9 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC68Q9H2F9 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC68Q9H2F9 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC68Q9H2F9 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC68Q9H2F9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.71■□□□□ 0.1
CCDC68Q9H2F9 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 CETN4P-206ENST00000642099 2168 ntBASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 SPDYE17-201ENST00000412399 783 ntBASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 AL589739.1-201ENST00000607720 493 ntBASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 KRT8P12-202ENST00000472924 1397 ntBASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC68Q9H2F9 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC68Q9H2F9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC68Q9H2F9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC68Q9H2F9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC68Q9H2F9 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC68Q9H2F9 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC68Q9H2F9 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC68Q9H2F9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC68Q9H2F9 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC68Q9H2F9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC68Q9H2F9 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC68Q9H2F9 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC68Q9H2F9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC68Q9H2F9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms