Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 AC069335.1-201ENST00000489972 472 ntBASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 AC023024.2-201ENST00000623561 1993 ntBASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 AC026748.1-201ENST00000624349 3251 ntBASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 HTR5BP-201ENST00000430851 1154 ntBASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 MROH4P-201ENST00000431302 1578 ntBASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
POLR2J3Q9H1A7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
POLR2J3Q9H1A7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
POLR2J3Q9H1A7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.46□□□□□ -0.1
POLR2J3Q9H1A7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
POLR2J3Q9H1A7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.46□□□□□ -0.1
POLR2J3Q9H1A7 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
POLR2J3Q9H1A7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
POLR2J3Q9H1A7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
POLR2J3Q9H1A7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
POLR2J3Q9H1A7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.46□□□□□ -0.1
POLR2J3Q9H1A7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 SPDYE17-201ENST00000412399 783 ntBASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 232.1 ms