Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM2Q9C040 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.41□□□□□ -0.1
TRIM2Q9C040 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM2Q9C040 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRIM2Q9C040 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM2Q9C040 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM2Q9C040 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM2Q9C040 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.41□□□□□ -0.1
TRIM2Q9C040 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.41□□□□□ -0.1
TRIM2Q9C040 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 KRT8P44-201ENST00000441609 1350 ntBASIC14.4□□□□□ -0.1
TRIM2Q9C040 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 RPL5P21-201ENST00000404620 815 ntBASIC14.4□□□□□ -0.1
TRIM2Q9C040 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.4□□□□□ -0.1
TRIM2Q9C040 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 AC067863.1-201ENST00000494933 530 ntBASIC14.4□□□□□ -0.1
TRIM2Q9C040 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 AL512356.2-201ENST00000546955 174 ntBASIC14.4□□□□□ -0.1
TRIM2Q9C040 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRIM2Q9C040 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM2Q9C040 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM2Q9C040 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TRIM2Q9C040 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRIM2Q9C040 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRIM2Q9C040 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRIM2Q9C040 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRIM2Q9C040 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRIM2Q9C040 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.39□□□□□ -0.11
TRIM2Q9C040 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.39□□□□□ -0.11
TRIM2Q9C040 CNN2P2-201ENST00000443536 909 ntBASIC14.39□□□□□ -0.11
TRIM2Q9C040 CNN2P3-201ENST00000450201 906 ntBASIC14.39□□□□□ -0.11
TRIM2Q9C040 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM2Q9C040 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.39□□□□□ -0.11
TRIM2Q9C040 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRIM2Q9C040 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM2Q9C040 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.39□□□□□ -0.11
TRIM2Q9C040 AL079307.3-201ENST00000556114 283 ntBASIC14.39□□□□□ -0.11
TRIM2Q9C040 MIR3197-201ENST00000582241 73 ntBASIC14.39□□□□□ -0.11
TRIM2Q9C040 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM2Q9C040 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM2Q9C040 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.39□□□□□ -0.11
TRIM2Q9C040 AL136317.3-201ENST00000618497 906 ntBASIC14.39□□□□□ -0.11
TRIM2Q9C040 MIR6069-201ENST00000620069 79 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms