Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3Q9BY71 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 FAM197Y7-201ENST00000432892 766 ntBASIC16.18■□□□□ 0.18
LRRC3Q9BY71 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 YBX1P6-201ENST00000442962 1002 ntBASIC16.18■□□□□ 0.18
LRRC3Q9BY71 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 AC078819.1-201ENST00000547454 765 ntBASIC16.18■□□□□ 0.18
LRRC3Q9BY71 AC012085.1-201ENST00000548270 765 ntBASIC16.18■□□□□ 0.18
LRRC3Q9BY71 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 RN7SL219P-201ENST00000582872 296 ntBASIC16.18■□□□□ 0.18
LRRC3Q9BY71 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 AC009542.2-202ENST00000619004 1067 ntBASIC16.18■□□□□ 0.18
LRRC3Q9BY71 GPR182-203ENST00000622922 591 ntBASIC16.18■□□□□ 0.18
LRRC3Q9BY71 BX539320.1-201ENST00000623759 877 ntBASIC16.18■□□□□ 0.18
LRRC3Q9BY71 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRC3Q9BY71 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 FAM8A2P-201ENST00000528813 1142 ntBASIC16.17■□□□□ 0.18
LRRC3Q9BY71 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 AL603832.2-201ENST00000566195 2125 ntBASIC16.17■□□□□ 0.18
LRRC3Q9BY71 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 AC010328.2-201ENST00000597698 1111 ntBASIC16.17■□□□□ 0.18
LRRC3Q9BY71 AC132938.4-201ENST00000623835 848 ntBASIC16.17■□□□□ 0.18
LRRC3Q9BY71 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 KRT8P35-201ENST00000483942 1338 ntBASIC16.17■□□□□ 0.18
LRRC3Q9BY71 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3Q9BY71 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms