Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 AC236430.1-201ENST00000402231 743 ntBASIC14.09□□□□□ -0.15
USB1Q9BQ65 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 AC004233.3-201ENST00000607794 1269 ntBASIC14.09□□□□□ -0.15
USB1Q9BQ65 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
USB1Q9BQ65 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
USB1Q9BQ65 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
USB1Q9BQ65 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.08□□□□□ -0.15
USB1Q9BQ65 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
USB1Q9BQ65 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
USB1Q9BQ65 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 AC090950.1-202ENST00000605733 644 ntBASIC14.08□□□□□ -0.16
USB1Q9BQ65 AL844908.2-201ENST00000609461 460 ntBASIC14.08□□□□□ -0.16
USB1Q9BQ65 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
USB1Q9BQ65 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USB1Q9BQ65 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
USB1Q9BQ65 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.07□□□□□ -0.16
USB1Q9BQ65 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms