Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 MYCLP2-201ENST00000449268 967 ntBASIC14.16□□□□□ -0.14
LRRC46Q96FV0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 MIR4321-201ENST00000592276 80 ntBASIC14.16□□□□□ -0.14
LRRC46Q96FV0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 AL162274.1-201ENST00000617191 1098 ntBASIC14.16□□□□□ -0.14
LRRC46Q96FV0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRC46Q96FV0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms