Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM11Q96F44 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRIM11Q96F44 AC015911.4-201ENST00000588022 1070 ntBASIC16.51■□□□□ 0.23
TRIM11Q96F44 AC074044.1-201ENST00000609673 707 ntBASIC16.51■□□□□ 0.23
TRIM11Q96F44 TEX28P1-201ENST00000613479 1221 ntBASIC16.51■□□□□ 0.23
TRIM11Q96F44 TEX28P2-201ENST00000617764 1221 ntBASIC16.51■□□□□ 0.23
TRIM11Q96F44 AC073592.8-201ENST00000624126 511 ntBASIC16.51■□□□□ 0.23
TRIM11Q96F44 Z92544.3-201ENST00000624747 417 ntBASIC16.51■□□□□ 0.23
TRIM11Q96F44 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM11Q96F44 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM11Q96F44 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM11Q96F44 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
TRIM11Q96F44 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM11Q96F44 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM11Q96F44 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM11Q96F44 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM11Q96F44 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM11Q96F44 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM11Q96F44 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM11Q96F44 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM11Q96F44 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM11Q96F44 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM11Q96F44 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM11Q96F44 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 TUBB3P1-201ENST00000405796 1332 ntBASIC16.5■□□□□ 0.23
TRIM11Q96F44 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM11Q96F44 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM11Q96F44 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM11Q96F44 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 RPL13P2-201ENST00000440687 659 ntBASIC16.5■□□□□ 0.23
TRIM11Q96F44 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM11Q96F44 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM11Q96F44 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM11Q96F44 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM11Q96F44 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM11Q96F44 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM11Q96F44 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM11Q96F44 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM11Q96F44 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM11Q96F44 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 ZBED1P1-201ENST00000502364 1930 ntBASIC16.49■□□□□ 0.23
TRIM11Q96F44 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 MIR1233-2-201ENST00000408138 82 ntBASIC16.49■□□□□ 0.23
TRIM11Q96F44 MIR1233-1-201ENST00000408722 82 ntBASIC16.49■□□□□ 0.23
TRIM11Q96F44 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 KLF2P3-201ENST00000451977 1087 ntBASIC16.49■□□□□ 0.23
TRIM11Q96F44 KRT18P43-201ENST00000469825 1281 ntBASIC16.49■□□□□ 0.23
TRIM11Q96F44 AC067863.1-201ENST00000494933 530 ntBASIC16.49■□□□□ 0.23
TRIM11Q96F44 SDHAP3-202ENST00000515467 728 ntBASIC16.49■□□□□ 0.23
TRIM11Q96F44 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 AC069120.2-201ENST00000524091 540 ntBASIC16.49■□□□□ 0.23
TRIM11Q96F44 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms