Protein–RNA interactions for Protein: Q96DV4

MRPL38, 39S ribosomal protein L38, mitochondrial, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38Q96DV4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRPL38Q96DV4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRPL38Q96DV4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MRPL38Q96DV4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRPL38Q96DV4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.08■□□□□ 0.16
MRPL38Q96DV4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRPL38Q96DV4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRPL38Q96DV4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MRPL38Q96DV4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRPL38Q96DV4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
MRPL38Q96DV4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRPL38Q96DV4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MRPL38Q96DV4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MRPL38Q96DV4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.07■□□□□ 0.16
MRPL38Q96DV4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.07■□□□□ 0.16
MRPL38Q96DV4 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 AL805961.1-201ENST00000642026 753 ntBASIC16.07■□□□□ 0.16
MRPL38Q96DV4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 AC055811.4-201ENST00000624039 1754 ntBASIC16.07■□□□□ 0.16
MRPL38Q96DV4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL38Q96DV4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 AP000593.2-201ENST00000542775 1433 ntBASIC16.06■□□□□ 0.16
MRPL38Q96DV4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.06■□□□□ 0.16
MRPL38Q96DV4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 AL160314.3-201ENST00000556041 767 ntBASIC16.06■□□□□ 0.16
MRPL38Q96DV4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 SAMD11P1-201ENST00000571429 661 ntBASIC16.06■□□□□ 0.16
MRPL38Q96DV4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 MIR4754-201ENST00000582477 89 ntBASIC16.06■□□□□ 0.16
MRPL38Q96DV4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 AC009955.4-201ENST00000597192 544 ntBASIC16.06■□□□□ 0.16
MRPL38Q96DV4 AL132994.2-201ENST00000603120 687 ntBASIC16.06■□□□□ 0.16
MRPL38Q96DV4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 AL645728.2-202ENST00000641679 227 ntBASIC16.06■□□□□ 0.16
MRPL38Q96DV4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL38Q96DV4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL38Q96DV4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL38Q96DV4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL38Q96DV4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
MRPL38Q96DV4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL38Q96DV4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL38Q96DV4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL38Q96DV4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL38Q96DV4 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL38Q96DV4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms