Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 WASH3P-207ENST00000560956 1394 ntBASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 FO538757.1-201ENST00000623083 1397 ntBASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 RPS2P28-201ENST00000314255 741 ntBASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 AC140658.5-201ENST00000438532 169 ntBASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 MIR4751-201ENST00000578027 74 ntBASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RAB3IL1Q8TBN0 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 AC139749.1-202ENST00000617529 3139 ntBASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 AP000347.1-202ENST00000435868 847 ntBASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 AC061975.2-201ENST00000581722 295 ntBASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB3IL1Q8TBN0 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RAB3IL1Q8TBN0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB3IL1Q8TBN0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB3IL1Q8TBN0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB3IL1Q8TBN0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB3IL1Q8TBN0 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB3IL1Q8TBN0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB3IL1Q8TBN0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB3IL1Q8TBN0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB3IL1Q8TBN0 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RAB3IL1Q8TBN0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
RAB3IL1Q8TBN0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB3IL1Q8TBN0 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RAB3IL1Q8TBN0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB3IL1Q8TBN0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB3IL1Q8TBN0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RAB3IL1Q8TBN0 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB3IL1Q8TBN0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms