Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 MIR346-201ENST00000362234 95 ntBASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 AC026396.1-201ENST00000419388 421 ntBASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 RNA5SP416-201ENST00000516838 111 ntBASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 KRT126P-201ENST00000549467 1181 ntBASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.08□□□□□ -0.16
BBS1Q8NFJ9 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 AC140479.7-201ENST00000636301 2332 ntBASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 PCDHA3-202ENST00000532566 4594 ntBASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 FAM58CP-201ENST00000435741 640 ntBASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 KRT8P48-201ENST00000515599 1220 ntBASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 SLC25A1P1-201ENST00000528351 927 ntBASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 LINC01225-203ENST00000563550 1244 ntBASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 AC140113.2-201ENST00000604370 208 ntBASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BBS1Q8NFJ9 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BBS1Q8NFJ9 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BBS1Q8NFJ9 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BBS1Q8NFJ9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BBS1Q8NFJ9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BBS1Q8NFJ9 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
BBS1Q8NFJ9 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BBS1Q8NFJ9 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BBS1Q8NFJ9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BBS1Q8NFJ9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BBS1Q8NFJ9 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BBS1Q8NFJ9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BBS1Q8NFJ9 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BBS1Q8NFJ9 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BBS1Q8NFJ9 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BBS1Q8NFJ9 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms