Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC135586.1-201ENST00000539323 574 ntBASIC13.68□□□□□ -0.22
CPEB3Q8NE35 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.68□□□□□ -0.22
CPEB3Q8NE35 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 UGT1A2P-201ENST00000454886 866 ntBASIC13.67□□□□□ -0.22
CPEB3Q8NE35 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 SPDYE18-201ENST00000510091 1050 ntBASIC13.67□□□□□ -0.22
CPEB3Q8NE35 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 AC013268.4-201ENST00000637413 2228 ntBASIC13.67□□□□□ -0.22
CPEB3Q8NE35 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 TMBIM7P-203ENST00000641617 1718 ntBASIC13.67□□□□□ -0.22
CPEB3Q8NE35 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CPEB3Q8NE35 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms