Protein–RNA interactions for Protein: Q8ND07

BBOF1, Basal body-orientation factor 1, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBOF1Q8ND07 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBOF1Q8ND07 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.07■□□□□ 0.16
BBOF1Q8ND07 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBOF1Q8ND07 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
BBOF1Q8ND07 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBOF1Q8ND07 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBOF1Q8ND07 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBOF1Q8ND07 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
BBOF1Q8ND07 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBOF1Q8ND07 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.07■□□□□ 0.16
BBOF1Q8ND07 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 AZGP1P1-201ENST00000411909 902 ntBASIC16.06■□□□□ 0.16
BBOF1Q8ND07 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 SPDYE11-202ENST00000450699 704 ntBASIC16.06■□□□□ 0.16
BBOF1Q8ND07 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 SPDYE9P-201ENST00000570642 692 ntBASIC16.06■□□□□ 0.16
BBOF1Q8ND07 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 SPDYE10P-202ENST00000612005 668 ntBASIC16.06■□□□□ 0.16
BBOF1Q8ND07 SPDYE8P-202ENST00000612377 668 ntBASIC16.06■□□□□ 0.16
BBOF1Q8ND07 AC091812.2-201ENST00000619081 385 ntBASIC16.06■□□□□ 0.16
BBOF1Q8ND07 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBOF1Q8ND07 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 AL591424.1-201ENST00000442569 1213 ntBASIC16.05■□□□□ 0.16
BBOF1Q8ND07 RPL13AP23-201ENST00000480739 586 ntBASIC16.05■□□□□ 0.16
BBOF1Q8ND07 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 AC243562.1-201ENST00000560672 389 ntBASIC16.05■□□□□ 0.16
BBOF1Q8ND07 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBOF1Q8ND07 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BBOF1Q8ND07 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BBOF1Q8ND07 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BBOF1Q8ND07 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.04■□□□□ 0.16
BBOF1Q8ND07 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BBOF1Q8ND07 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
BBOF1Q8ND07 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.04■□□□□ 0.16
BBOF1Q8ND07 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BBOF1Q8ND07 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
BBOF1Q8ND07 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BBOF1Q8ND07 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms