Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 KRT8P21-201ENST00000430398 1491 ntBASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 AC021723.1-201ENST00000486306 515 ntBASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 AC026434.2-201ENST00000506094 1078 ntBASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 NPM1P43-201ENST00000558669 786 ntBASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 AL136295.7-201ENST00000619226 1200 ntBASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.29□□□□□ -0.12
COL27A1Q8IZC6 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 AL157791.1-201ENST00000553667 1699 ntBASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 AC006058.4-201ENST00000624016 1670 ntBASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 AL157407.1-201ENST00000435784 904 ntBASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 FGFR3P1-201ENST00000449999 601 ntBASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 AC020922.3-201ENST00000595064 547 ntBASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
COL27A1Q8IZC6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 AC011742.3-201ENST00000439053 820 ntBASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 AC104784.1-201ENST00000473096 294 ntBASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 AC003102.2-201ENST00000589195 1469 ntBASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.27□□□□□ -0.12
COL27A1Q8IZC6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms