Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM50Q86XT4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM50Q86XT4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.33■□□□□ 0.37
TRIM50Q86XT4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM50Q86XT4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM50Q86XT4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM50Q86XT4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TRIM50Q86XT4 AC092127.1-201ENST00000567093 3455 ntBASIC17.33■□□□□ 0.37
TRIM50Q86XT4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM50Q86XT4 AC022188.1-201ENST00000620960 1664 ntBASIC17.33■□□□□ 0.37
TRIM50Q86XT4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TRIM50Q86XT4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM50Q86XT4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 FAM86MP-201ENST00000340703 885 ntBASIC17.33■□□□□ 0.36
TRIM50Q86XT4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 CSF2RBP1-201ENST00000447905 391 ntBASIC17.33■□□□□ 0.36
TRIM50Q86XT4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 AP000812.2-201ENST00000538934 718 ntBASIC17.33■□□□□ 0.36
TRIM50Q86XT4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 KRT90P-201ENST00000549264 1064 ntBASIC17.33■□□□□ 0.36
TRIM50Q86XT4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TRIM50Q86XT4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 AL138799.1-201ENST00000448213 1675 ntBASIC17.32■□□□□ 0.36
TRIM50Q86XT4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 AL583810.1-201ENST00000553344 1045 ntBASIC17.32■□□□□ 0.36
TRIM50Q86XT4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 AC025181.2-201ENST00000606994 802 ntBASIC17.32■□□□□ 0.36
TRIM50Q86XT4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM50Q86XT4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.31■□□□□ 0.36
TRIM50Q86XT4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms