Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.41□□□□□ -0.1
ZNF550Q7Z398 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.4□□□□□ -0.1
ZNF550Q7Z398 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 KRT8P44-201ENST00000441609 1350 ntBASIC14.4□□□□□ -0.1
ZNF550Q7Z398 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 HLA-V-204ENST00000476601 1289 ntBASIC14.4□□□□□ -0.1
ZNF550Q7Z398 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 AL033527.5-202ENST00000641632 1098 ntBASIC14.4□□□□□ -0.1
ZNF550Q7Z398 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF550Q7Z398 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 AC144831.1-201ENST00000573312 2656 ntBASIC14.39□□□□□ -0.11
ZNF550Q7Z398 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 AL080243.2-201ENST00000418783 582 ntBASIC14.39□□□□□ -0.11
ZNF550Q7Z398 AC027369.6-201ENST00000525520 931 ntBASIC14.39□□□□□ -0.11
ZNF550Q7Z398 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms