Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 GPALPP1-207ENST00000611650 899 ntBASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 AC087499.5-201ENST00000452760 1342 ntBASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NHLRC1Q6VVB1 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 AC125807.1-201ENST00000483097 614 ntBASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NHLRC1Q6VVB1 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NHLRC1Q6VVB1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms