Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.02□□□□□ -0.33
ANKRD55Q3KP44 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 SBF1P1-201ENST00000444527 5631 ntBASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 RPS2P1-201ENST00000434010 821 ntBASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 AC108073.2-201ENST00000464002 357 ntBASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 AC109635.5-201ENST00000533593 962 ntBASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 AC105339.3-201ENST00000560043 636 ntBASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 AC008735.5-201ENST00000623544 497 ntBASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 AC005593.1-201ENST00000624894 515 ntBASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 WASH3P-207ENST00000560956 1394 ntBASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 FO538757.1-201ENST00000623083 1397 ntBASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ANKRD55Q3KP44 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ANKRD55Q3KP44 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13□□□□□ -0.33
ANKRD55Q3KP44 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms