Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TSR1Q2NL82 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.21■□□□□ 0.35
TSR1Q2NL82 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.21■□□□□ 0.35
TSR1Q2NL82 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.21■□□□□ 0.35
TSR1Q2NL82 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.21■□□□□ 0.35
TSR1Q2NL82 AC112191.1-201ENST00000523689 701 ntBASIC17.21■□□□□ 0.35
TSR1Q2NL82 SLC25A1P1-201ENST00000528351 927 ntBASIC17.21■□□□□ 0.35
TSR1Q2NL82 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.21■□□□□ 0.35
TSR1Q2NL82 AL450472.2-201ENST00000603663 1156 ntBASIC17.21■□□□□ 0.35
TSR1Q2NL82 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSR1Q2NL82 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
TSR1Q2NL82 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSR1Q2NL82 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSR1Q2NL82 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TSR1Q2NL82 AC007686.3-201ENST00000619017 3487 ntBASIC17.21■□□□□ 0.35
TSR1Q2NL82 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSR1Q2NL82 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TSR1Q2NL82 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSR1Q2NL82 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSR1Q2NL82 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.21■□□□□ 0.35
TSR1Q2NL82 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TSR1Q2NL82 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TSR1Q2NL82 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TSR1Q2NL82 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TSR1Q2NL82 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TSR1Q2NL82 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TSR1Q2NL82 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 MIR574-201ENST00000385209 96 ntBASIC17.2■□□□□ 0.34
TSR1Q2NL82 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 AC074386.1-202ENST00000463561 864 ntBASIC17.2■□□□□ 0.34
TSR1Q2NL82 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 CICP23-201ENST00000605013 2741 ntBASIC17.2■□□□□ 0.34
TSR1Q2NL82 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TSR1Q2NL82 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.2■□□□□ 0.34
TSR1Q2NL82 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TSR1Q2NL82 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TSR1Q2NL82 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TSR1Q2NL82 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.19■□□□□ 0.34
TSR1Q2NL82 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.19■□□□□ 0.34
TSR1Q2NL82 AC013726.1-201ENST00000563747 2285 ntBASIC17.19■□□□□ 0.34
TSR1Q2NL82 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TSR1Q2NL82 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TSR1Q2NL82 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TSR1Q2NL82 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TSR1Q2NL82 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TSR1Q2NL82 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TSR1Q2NL82 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TSR1Q2NL82 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TSR1Q2NL82 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TSR1Q2NL82 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TSR1Q2NL82 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TSR1Q2NL82 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TSR1Q2NL82 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.19■□□□□ 0.34
TSR1Q2NL82 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TSR1Q2NL82 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TSR1Q2NL82 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TSR1Q2NL82 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms