Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 AC093813.1-201ENST00000605066 256 ntBASIC19.07■□□□□ 0.64
ATP2B3Q16720 AL512343.1-201ENST00000605837 169 ntBASIC19.07■□□□□ 0.64
ATP2B3Q16720 AC025181.2-201ENST00000606994 802 ntBASIC19.07■□□□□ 0.64
ATP2B3Q16720 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ATP2B3Q16720 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP2B3Q16720 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP2B3Q16720 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2B3Q16720 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2B3Q16720 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ATP2B3Q16720 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2B3Q16720 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
ATP2B3Q16720 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2B3Q16720 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP2B3Q16720 AC018665.1-201ENST00000622927 1362 ntBASIC19.06■□□□□ 0.64
ATP2B3Q16720 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2B3Q16720 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2B3Q16720 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2B3Q16720 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 AC144831.1-201ENST00000573312 2656 ntBASIC19.06■□□□□ 0.64
ATP2B3Q16720 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2B3Q16720 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2B3Q16720 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2B3Q16720 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2B3Q16720 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2B3Q16720 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.06■□□□□ 0.64
ATP2B3Q16720 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2B3Q16720 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 CROCCP4-201ENST00000457096 498 ntBASIC19.06■□□□□ 0.64
ATP2B3Q16720 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 AC068587.3-201ENST00000526613 355 ntBASIC19.06■□□□□ 0.64
ATP2B3Q16720 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2B3Q16720 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2B3Q16720 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2B3Q16720 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2B3Q16720 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2B3Q16720 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2B3Q16720 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2B3Q16720 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2B3Q16720 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2B3Q16720 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2B3Q16720 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2B3Q16720 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2B3Q16720 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.05■□□□□ 0.64
ATP2B3Q16720 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2B3Q16720 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2B3Q16720 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2B3Q16720 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.05■□□□□ 0.64
ATP2B3Q16720 AC093433.1-201ENST00000458048 571 ntBASIC19.05■□□□□ 0.64
ATP2B3Q16720 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.05■□□□□ 0.64
ATP2B3Q16720 PTP4A1P2-201ENST00000546033 454 ntBASIC19.05■□□□□ 0.64
ATP2B3Q16720 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ATP2B3Q16720 AP001063.1-201ENST00000568332 529 ntBASIC19.05■□□□□ 0.64
ATP2B3Q16720 AC009486.1-201ENST00000569860 813 ntBASIC19.05■□□□□ 0.64
ATP2B3Q16720 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.05■□□□□ 0.64
ATP2B3Q16720 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.05■□□□□ 0.64
ATP2B3Q16720 AL359881.2-201ENST00000602973 570 ntBASIC19.05■□□□□ 0.64
ATP2B3Q16720 AC017083.2-201ENST00000608069 979 ntBASIC19.05■□□□□ 0.64
ATP2B3Q16720 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.05■□□□□ 0.64
ATP2B3Q16720 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.05■□□□□ 0.64
ATP2B3Q16720 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.05■□□□□ 0.64
ATP2B3Q16720 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2B3Q16720 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.05■□□□□ 0.64
ATP2B3Q16720 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2B3Q16720 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2B3Q16720 MSTO2P-201ENST00000314835 1709 ntBASIC19.05■□□□□ 0.64
ATP2B3Q16720 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ATP2B3Q16720 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2B3Q16720 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2B3Q16720 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2B3Q16720 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2B3Q16720 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.05■□□□□ 0.64
ATP2B3Q16720 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
ATP2B3Q16720 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ATP2B3Q16720 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2B3Q16720 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms