Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBXN1Q04323 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBXN1Q04323 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
UBXN1Q04323 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBXN1Q04323 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBXN1Q04323 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBXN1Q04323 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
UBXN1Q04323 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
UBXN1Q04323 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
UBXN1Q04323 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.12■□□□□ 0.33
UBXN1Q04323 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.12■□□□□ 0.33
UBXN1Q04323 AC084364.1-201ENST00000551967 1556 ntBASIC17.12■□□□□ 0.33
UBXN1Q04323 AL365209.1-201ENST00000624418 6473 ntBASIC17.12■□□□□ 0.33
UBXN1Q04323 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.12■□□□□ 0.33
UBXN1Q04323 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
UBXN1Q04323 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.12■□□□□ 0.33
UBXN1Q04323 RPL5P21-201ENST00000404620 815 ntBASIC17.12■□□□□ 0.33
UBXN1Q04323 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.12■□□□□ 0.33
UBXN1Q04323 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.12■□□□□ 0.33
UBXN1Q04323 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.12■□□□□ 0.33
UBXN1Q04323 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.12■□□□□ 0.33
UBXN1Q04323 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
UBXN1Q04323 POLD2P1-201ENST00000511220 997 ntBASIC17.12■□□□□ 0.33
UBXN1Q04323 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.12■□□□□ 0.33
UBXN1Q04323 KRT18P58-201ENST00000527480 1120 ntBASIC17.12■□□□□ 0.33
UBXN1Q04323 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.12■□□□□ 0.33
UBXN1Q04323 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.12■□□□□ 0.33
UBXN1Q04323 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.12■□□□□ 0.33
UBXN1Q04323 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.12■□□□□ 0.33
UBXN1Q04323 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.12■□□□□ 0.33
UBXN1Q04323 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.12■□□□□ 0.33
UBXN1Q04323 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.12■□□□□ 0.33
UBXN1Q04323 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.12■□□□□ 0.33
UBXN1Q04323 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 AC018529.1-201ENST00000613063 361 ntBASIC17.12■□□□□ 0.33
UBXN1Q04323 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
UBXN1Q04323 AL390755.1-201ENST00000623716 2027 ntBASIC17.12■□□□□ 0.33
UBXN1Q04323 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
UBXN1Q04323 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.12■□□□□ 0.33
UBXN1Q04323 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.12■□□□□ 0.33
UBXN1Q04323 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.12■□□□□ 0.33
UBXN1Q04323 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBXN1Q04323 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.12■□□□□ 0.33
UBXN1Q04323 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
UBXN1Q04323 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
UBXN1Q04323 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN1Q04323 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
UBXN1Q04323 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN1Q04323 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN1Q04323 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
UBXN1Q04323 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN1Q04323 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN1Q04323 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.11■□□□□ 0.33
UBXN1Q04323 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.11■□□□□ 0.33
UBXN1Q04323 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.11■□□□□ 0.33
UBXN1Q04323 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.11■□□□□ 0.33
UBXN1Q04323 CEND1P1-201ENST00000451006 455 ntBASIC17.11■□□□□ 0.33
UBXN1Q04323 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.11■□□□□ 0.33
UBXN1Q04323 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN1Q04323 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.11■□□□□ 0.33
UBXN1Q04323 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.11■□□□□ 0.33
UBXN1Q04323 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.11■□□□□ 0.33
UBXN1Q04323 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.11■□□□□ 0.33
UBXN1Q04323 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.11■□□□□ 0.33
UBXN1Q04323 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.11■□□□□ 0.33
UBXN1Q04323 AC022145.2-201ENST00000598203 171 ntBASIC17.11■□□□□ 0.33
UBXN1Q04323 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
UBXN1Q04323 AC105339.1-204ENST00000636249 355 ntBASIC17.11■□□□□ 0.33
UBXN1Q04323 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN1Q04323 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
UBXN1Q04323 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN1Q04323 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN1Q04323 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.11■□□□□ 0.33
UBXN1Q04323 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN1Q04323 AC232323.1-201ENST00000540724 2099 ntBASIC17.11■□□□□ 0.33
UBXN1Q04323 REXO1L5P-201ENST00000622260 2098 ntBASIC17.11■□□□□ 0.33
UBXN1Q04323 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN1Q04323 AC026748.1-201ENST00000624349 3251 ntBASIC17.11■□□□□ 0.33
UBXN1Q04323 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms