Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK4P57078 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC20.32■□□□□ 0.84
RIPK4P57078 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RIPK4P57078 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.32■□□□□ 0.84
RIPK4P57078 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.32■□□□□ 0.84
RIPK4P57078 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK4P57078 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC20.32■□□□□ 0.84
RIPK4P57078 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK4P57078 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RIPK4P57078 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK4P57078 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK4P57078 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC20.32■□□□□ 0.84
RIPK4P57078 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC20.32■□□□□ 0.84
RIPK4P57078 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK4P57078 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC20.32■□□□□ 0.84
RIPK4P57078 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK4P57078 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RIPK4P57078 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK4P57078 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK4P57078 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.32■□□□□ 0.84
RIPK4P57078 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC20.32■□□□□ 0.84
RIPK4P57078 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIPK4P57078 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
RIPK4P57078 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK4P57078 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RIPK4P57078 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK4P57078 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK4P57078 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.31■□□□□ 0.84
RIPK4P57078 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK4P57078 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK4P57078 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK4P57078 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK4P57078 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC20.31■□□□□ 0.84
RIPK4P57078 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RIPK4P57078 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK4P57078 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.31■□□□□ 0.84
RIPK4P57078 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK4P57078 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
RIPK4P57078 RPL5P21-201ENST00000404620 815 ntBASIC20.31■□□□□ 0.84
RIPK4P57078 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK4P57078 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.31■□□□□ 0.84
RIPK4P57078 TTTY23B-201ENST00000442790 549 ntBASIC20.31■□□□□ 0.84
RIPK4P57078 AC007389.4-201ENST00000454674 793 ntBASIC20.31■□□□□ 0.84
RIPK4P57078 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC20.31■□□□□ 0.84
RIPK4P57078 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK4P57078 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC20.31■□□□□ 0.84
RIPK4P57078 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RIPK4P57078 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC20.31■□□□□ 0.84
RIPK4P57078 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC20.31■□□□□ 0.84
RIPK4P57078 CICP11-201ENST00000434745 2827 ntBASIC20.31■□□□□ 0.84
RIPK4P57078 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK4P57078 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC20.31■□□□□ 0.84
RIPK4P57078 AC112693.3-201ENST00000624819 1983 ntBASIC20.31■□□□□ 0.84
RIPK4P57078 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC20.31■□□□□ 0.84
RIPK4P57078 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK4P57078 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK4P57078 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK4P57078 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC20.31■□□□□ 0.84
RIPK4P57078 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIPK4P57078 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK4P57078 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RIPK4P57078 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RIPK4P57078 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK4P57078 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK4P57078 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK4P57078 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK4P57078 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK4P57078 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.3■□□□□ 0.84
RIPK4P57078 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK4P57078 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RIPK4P57078 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK4P57078 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RIPK4P57078 ACTG1P3-201ENST00000431775 1114 ntBASIC20.3■□□□□ 0.84
RIPK4P57078 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.3■□□□□ 0.84
RIPK4P57078 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.3■□□□□ 0.84
RIPK4P57078 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK4P57078 IFT20-206ENST00000578122 834 ntTSL 2 BASIC20.3■□□□□ 0.84
RIPK4P57078 IFT20-208ENST00000578985 831 ntTSL 3 BASIC20.3■□□□□ 0.84
RIPK4P57078 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.3■□□□□ 0.84
RIPK4P57078 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.3■□□□□ 0.84
RIPK4P57078 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
RIPK4P57078 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC20.3■□□□□ 0.84
RIPK4P57078 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK4P57078 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RIPK4P57078 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK4P57078 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK4P57078 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK4P57078 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK4P57078 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK4P57078 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
RIPK4P57078 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK4P57078 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RIPK4P57078 ING5-213ENST00000636051 4199 ntTSL 5 BASIC20.3■□□□□ 0.84
RIPK4P57078 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK4P57078 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC20.3■□□□□ 0.84
RIPK4P57078 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC20.3■□□□□ 0.84
RIPK4P57078 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC20.29■□□□□ 0.84
RIPK4P57078 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms