Protein–RNA interactions for Protein: P55773

CCL23, C-C motif chemokine 23, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL23P55773 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL23P55773 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL23P55773 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL23P55773 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL23P55773 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCL23P55773 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL23P55773 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL23P55773 AC007787.1-201ENST00000588095 1583 ntBASIC16.78■□□□□ 0.28
CCL23P55773 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
CCL23P55773 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCL23P55773 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL23P55773 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL23P55773 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.78■□□□□ 0.28
CCL23P55773 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.78■□□□□ 0.28
CCL23P55773 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.78■□□□□ 0.28
CCL23P55773 AC021723.1-201ENST00000486306 515 ntBASIC16.78■□□□□ 0.28
CCL23P55773 AC100850.1-201ENST00000506768 649 ntBASIC16.78■□□□□ 0.28
CCL23P55773 AC005740.2-201ENST00000511085 419 ntBASIC16.78■□□□□ 0.28
CCL23P55773 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL23P55773 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL23P55773 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL23P55773 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL23P55773 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCL23P55773 AL133499.1-201ENST00000596207 608 ntBASIC16.78■□□□□ 0.28
CCL23P55773 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL23P55773 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.78■□□□□ 0.28
CCL23P55773 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL23P55773 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL23P55773 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL23P55773 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL23P55773 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL23P55773 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL23P55773 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CCL23P55773 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL23P55773 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL23P55773 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL23P55773 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL23P55773 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.78■□□□□ 0.28
CCL23P55773 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.78■□□□□ 0.28
CCL23P55773 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL23P55773 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL23P55773 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL23P55773 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCL23P55773 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL23P55773 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL23P55773 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCL23P55773 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL23P55773 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.77■□□□□ 0.28
CCL23P55773 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.77■□□□□ 0.28
CCL23P55773 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCL23P55773 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL23P55773 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL23P55773 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCL23P55773 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL23P55773 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL23P55773 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL23P55773 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.77■□□□□ 0.28
CCL23P55773 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCL23P55773 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.77■□□□□ 0.28
CCL23P55773 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCL23P55773 EIF3FP3-201ENST00000434851 1086 ntBASIC16.77■□□□□ 0.28
CCL23P55773 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.77■□□□□ 0.28
CCL23P55773 AC022217.1-201ENST00000521069 738 ntBASIC16.77■□□□□ 0.28
CCL23P55773 AP003171.2-201ENST00000528208 925 ntBASIC16.77■□□□□ 0.28
CCL23P55773 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCL23P55773 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCL23P55773 ZACNP1-201ENST00000612259 710 ntBASIC16.77■□□□□ 0.28
CCL23P55773 AL353726.2-201ENST00000623259 884 ntBASIC16.77■□□□□ 0.28
CCL23P55773 AC079336.7-201ENST00000623428 1078 ntBASIC16.77■□□□□ 0.28
CCL23P55773 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL23P55773 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCL23P55773 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCL23P55773 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL23P55773 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL23P55773 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.77■□□□□ 0.27
CCL23P55773 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL23P55773 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL23P55773 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL23P55773 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.77■□□□□ 0.27
CCL23P55773 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL23P55773 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCL23P55773 AC008132.1-202ENST00000342005 1389 ntBASIC16.77■□□□□ 0.27
CCL23P55773 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL23P55773 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.76■□□□□ 0.27
CCL23P55773 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.76■□□□□ 0.27
CCL23P55773 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCL23P55773 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL23P55773 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCL23P55773 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCL23P55773 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL23P55773 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL23P55773 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL23P55773 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCL23P55773 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCL23P55773 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCL23P55773 ACTG1P2-201ENST00000415776 1125 ntBASIC16.76■□□□□ 0.27
CCL23P55773 POM121L8P-201ENST00000417732 1281 ntBASIC16.76■□□□□ 0.27
CCL23P55773 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.76■□□□□ 0.27
CCL23P55773 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL23P55773 ACTG1P11-201ENST00000425411 1125 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms