Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDE1AP54750 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PDE1AP54750 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.98■□□□□ 0.63
PDE1AP54750 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.98■□□□□ 0.63
PDE1AP54750 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDE1AP54750 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.98■□□□□ 0.63
PDE1AP54750 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.98■□□□□ 0.63
PDE1AP54750 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.98■□□□□ 0.63
PDE1AP54750 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.98■□□□□ 0.63
PDE1AP54750 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.98■□□□□ 0.63
PDE1AP54750 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.98■□□□□ 0.63
PDE1AP54750 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE1AP54750 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE1AP54750 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PDE1AP54750 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE1AP54750 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDE1AP54750 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE1AP54750 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
PDE1AP54750 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE1AP54750 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE1AP54750 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDE1AP54750 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.98■□□□□ 0.63
PDE1AP54750 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PDE1AP54750 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PDE1AP54750 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
PDE1AP54750 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.97■□□□□ 0.63
PDE1AP54750 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.97■□□□□ 0.63
PDE1AP54750 GAPDHP40-201ENST00000505218 1006 ntBASIC18.97■□□□□ 0.63
PDE1AP54750 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.97■□□□□ 0.63
PDE1AP54750 RARRES2P5-201ENST00000564013 466 ntBASIC18.97■□□□□ 0.63
PDE1AP54750 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.97■□□□□ 0.63
PDE1AP54750 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
PDE1AP54750 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.97■□□□□ 0.63
PDE1AP54750 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PDE1AP54750 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.97■□□□□ 0.63
PDE1AP54750 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PDE1AP54750 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.97■□□□□ 0.63
PDE1AP54750 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE1AP54750 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE1AP54750 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE1AP54750 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.96■□□□□ 0.63
PDE1AP54750 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDE1AP54750 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE1AP54750 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
PDE1AP54750 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE1AP54750 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.96■□□□□ 0.63
PDE1AP54750 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE1AP54750 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE1AP54750 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE1AP54750 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
PDE1AP54750 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE1AP54750 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE1AP54750 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE1AP54750 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE1AP54750 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
PDE1AP54750 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.96■□□□□ 0.63
PDE1AP54750 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.96■□□□□ 0.63
PDE1AP54750 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PDE1AP54750 GNAQP1-201ENST00000444815 1067 ntBASIC18.96■□□□□ 0.63
PDE1AP54750 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.96■□□□□ 0.63
PDE1AP54750 DOC2GP-202ENST00000514950 1163 ntBASIC18.96■□□□□ 0.63
PDE1AP54750 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.96■□□□□ 0.63
PDE1AP54750 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.96■□□□□ 0.63
PDE1AP54750 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.96■□□□□ 0.63
PDE1AP54750 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.96■□□□□ 0.63
PDE1AP54750 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.96■□□□□ 0.63
PDE1AP54750 AC011270.2-201ENST00000624293 2550 ntBASIC18.96■□□□□ 0.63
PDE1AP54750 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PDE1AP54750 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE1AP54750 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE1AP54750 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE1AP54750 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE1AP54750 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.96■□□□□ 0.63
PDE1AP54750 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
PDE1AP54750 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PDE1AP54750 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms