Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.19■□□□□ 0.02
CLCN2P51788 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN2P51788 KLF2P3-201ENST00000451977 1087 ntBASIC15.19■□□□□ 0.02
CLCN2P51788 AC125807.1-201ENST00000483097 614 ntBASIC15.19■□□□□ 0.02
CLCN2P51788 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.19■□□□□ 0.02
CLCN2P51788 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN2P51788 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN2P51788 AL355385.1-201ENST00000606123 409 ntBASIC15.19■□□□□ 0.02
CLCN2P51788 AC003101.2-201ENST00000612557 442 ntBASIC15.19■□□□□ 0.02
CLCN2P51788 AC093512.1-201ENST00000617969 520 ntBASIC15.19■□□□□ 0.02
CLCN2P51788 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 AGAP7P-201ENST00000582299 2062 ntBASIC15.19■□□□□ 0.02
CLCN2P51788 AGAP14-201ENST00000624701 2060 ntBASIC15.19■□□□□ 0.02
CLCN2P51788 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CLCN2P51788 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CLCN2P51788 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CLCN2P51788 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN2P51788 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.19■□□□□ 0.02
CLCN2P51788 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.19■□□□□ 0.02
CLCN2P51788 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CLCN2P51788 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN2P51788 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.18■□□□□ 0.02
CLCN2P51788 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.18■□□□□ 0.02
CLCN2P51788 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.18■□□□□ 0.02
CLCN2P51788 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
CLCN2P51788 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 AL589702.1-201ENST00000641229 1509 ntBASIC15.18■□□□□ 0.02
CLCN2P51788 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CLCN2P51788 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
CLCN2P51788 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.18■□□□□ 0.02
CLCN2P51788 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.18■□□□□ 0.02
CLCN2P51788 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.18■□□□□ 0.02
CLCN2P51788 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.18■□□□□ 0.02
CLCN2P51788 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.18■□□□□ 0.02
CLCN2P51788 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CLCN2P51788 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CLCN2P51788 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.18■□□□□ 0.02
CLCN2P51788 AL353705.2-201ENST00000428243 662 ntBASIC15.18■□□□□ 0.02
CLCN2P51788 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.18■□□□□ 0.02
CLCN2P51788 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.18■□□□□ 0.02
CLCN2P51788 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.18■□□□□ 0.02
CLCN2P51788 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CLCN2P51788 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.18■□□□□ 0.02
CLCN2P51788 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CLCN2P51788 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.18■□□□□ 0.02
CLCN2P51788 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CLCN2P51788 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.18■□□□□ 0.02
CLCN2P51788 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.18■□□□□ 0.02
CLCN2P51788 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN2P51788 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
CLCN2P51788 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CLCN2P51788 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CLCN2P51788 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 AC068587.6-202ENST00000641839 5619 ntBASIC15.17■□□□□ 0.02
CLCN2P51788 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.17■□□□□ 0.02
CLCN2P51788 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.17■□□□□ 0.02
CLCN2P51788 AC112693.3-201ENST00000624819 1983 ntBASIC15.17■□□□□ 0.02
CLCN2P51788 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.17■□□□□ 0.02
CLCN2P51788 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.17■□□□□ 0.02
CLCN2P51788 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CLCN2P51788 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.17■□□□□ 0.02
CLCN2P51788 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms