Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.89■□□□□ 0.29
PDE6CP51160 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.89■□□□□ 0.29
PDE6CP51160 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.89■□□□□ 0.29
PDE6CP51160 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.89■□□□□ 0.29
PDE6CP51160 AC015922.1-201ENST00000421102 1152 ntBASIC16.89■□□□□ 0.29
PDE6CP51160 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.89■□□□□ 0.29
PDE6CP51160 CRB3P1-201ENST00000449338 276 ntBASIC16.89■□□□□ 0.29
PDE6CP51160 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PDE6CP51160 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PDE6CP51160 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.89■□□□□ 0.29
PDE6CP51160 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.89■□□□□ 0.29
PDE6CP51160 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.89■□□□□ 0.29
PDE6CP51160 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PDE6CP51160 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.89■□□□□ 0.29
PDE6CP51160 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PDE6CP51160 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PDE6CP51160 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.89■□□□□ 0.29
PDE6CP51160 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.89■□□□□ 0.29
PDE6CP51160 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6CP51160 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
PDE6CP51160 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.88■□□□□ 0.29
PDE6CP51160 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PDE6CP51160 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.88■□□□□ 0.29
PDE6CP51160 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.88■□□□□ 0.29
PDE6CP51160 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PDE6CP51160 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
PDE6CP51160 HIST3H2BA-201ENST00000436555 524 ntBASIC16.88■□□□□ 0.29
PDE6CP51160 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.88■□□□□ 0.29
PDE6CP51160 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.88■□□□□ 0.29
PDE6CP51160 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.88■□□□□ 0.29
PDE6CP51160 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
PDE6CP51160 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.88■□□□□ 0.29
PDE6CP51160 AC239800.4-201ENST00000603712 296 ntBASIC16.88■□□□□ 0.29
PDE6CP51160 MIR6069-201ENST00000620069 79 ntBASIC16.88■□□□□ 0.29
PDE6CP51160 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.88■□□□□ 0.29
PDE6CP51160 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.88■□□□□ 0.29
PDE6CP51160 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.88■□□□□ 0.29
PDE6CP51160 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.88■□□□□ 0.29
PDE6CP51160 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.88■□□□□ 0.29
PDE6CP51160 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6CP51160 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.88■□□□□ 0.29
PDE6CP51160 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PDE6CP51160 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6CP51160 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6CP51160 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6CP51160 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6CP51160 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6CP51160 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.87■□□□□ 0.29
PDE6CP51160 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PDE6CP51160 AL109954.1-202ENST00000564051 2148 ntBASIC16.87■□□□□ 0.29
PDE6CP51160 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.87■□□□□ 0.29
PDE6CP51160 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6CP51160 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6CP51160 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6CP51160 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6CP51160 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.87■□□□□ 0.29
PDE6CP51160 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PDE6CP51160 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6CP51160 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6CP51160 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.87■□□□□ 0.29
PDE6CP51160 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.87■□□□□ 0.29
PDE6CP51160 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.87■□□□□ 0.29
PDE6CP51160 SPTLC1P1-201ENST00000447199 261 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms