Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 AL512638.1-201ENST00000457493 794 ntBASIC13.92□□□□□ -0.18
CSNK1A1P48729 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 ZNF890P-202ENST00000530367 1156 ntBASIC13.92□□□□□ -0.18
CSNK1A1P48729 RFPL4AP1-201ENST00000530883 850 ntBASIC13.92□□□□□ -0.18
CSNK1A1P48729 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 AC104640.1-201ENST00000562617 2109 ntBASIC13.92□□□□□ -0.18
CSNK1A1P48729 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 AC015922.1-201ENST00000421102 1152 ntBASIC13.91□□□□□ -0.18
CSNK1A1P48729 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 BASP1P1-201ENST00000430708 665 ntBASIC13.91□□□□□ -0.18
CSNK1A1P48729 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 AC093214.1-201ENST00000511688 1107 ntBASIC13.91□□□□□ -0.18
CSNK1A1P48729 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 LINC01115-203ENST00000606068 577 ntBASIC13.91□□□□□ -0.18
CSNK1A1P48729 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CSNK1A1P48729 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1A1P48729 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CSNK1A1P48729 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CSNK1A1P48729 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms