Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.16■□□□□ 0.34
RFC5P40937 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 OR8S1-201ENST00000310194 1080 ntBASIC17.16■□□□□ 0.34
RFC5P40937 ACKR1-201ENST00000368121 1240 ntBASIC17.16■□□□□ 0.34
RFC5P40937 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RFC5P40937 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RFC5P40937 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RFC5P40937 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.16■□□□□ 0.34
RFC5P40937 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.16■□□□□ 0.34
RFC5P40937 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.16■□□□□ 0.34
RFC5P40937 USP32P1-208ENST00000506594 1164 ntBASIC17.16■□□□□ 0.34
RFC5P40937 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 PTP4A1P2-201ENST00000546033 454 ntBASIC17.16■□□□□ 0.34
RFC5P40937 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.16■□□□□ 0.34
RFC5P40937 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.16■□□□□ 0.34
RFC5P40937 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.16■□□□□ 0.34
RFC5P40937 BTNL10-201ENST00000595971 695 ntBASIC17.16■□□□□ 0.34
RFC5P40937 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.16■□□□□ 0.34
RFC5P40937 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RFC5P40937 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RFC5P40937 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.16■□□□□ 0.34
RFC5P40937 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RFC5P40937 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.15■□□□□ 0.34
RFC5P40937 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.15■□□□□ 0.34
RFC5P40937 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RFC5P40937 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RFC5P40937 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.15■□□□□ 0.34
RFC5P40937 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
RFC5P40937 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RFC5P40937 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RFC5P40937 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.15■□□□□ 0.34
RFC5P40937 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.15■□□□□ 0.34
RFC5P40937 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.15■□□□□ 0.34
RFC5P40937 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.15■□□□□ 0.34
RFC5P40937 AC068587.3-201ENST00000526613 355 ntBASIC17.15■□□□□ 0.34
RFC5P40937 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RFC5P40937 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.15■□□□□ 0.34
RFC5P40937 AC233724.13-201ENST00000598383 410 ntBASIC17.15■□□□□ 0.34
RFC5P40937 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.15■□□□□ 0.34
RFC5P40937 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.15■□□□□ 0.34
RFC5P40937 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.15■□□□□ 0.34
RFC5P40937 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RFC5P40937 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.15■□□□□ 0.34
RFC5P40937 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.15■□□□□ 0.34
RFC5P40937 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.15■□□□□ 0.34
RFC5P40937 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.15■□□□□ 0.34
RFC5P40937 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC5P40937 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
RFC5P40937 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.14■□□□□ 0.33
RFC5P40937 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RFC5P40937 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms