Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RORAP35398 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.83□□□□□ -0.03
RORAP35398 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
RORAP35398 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
RORAP35398 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.83□□□□□ -0.04
RORAP35398 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RORAP35398 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.83□□□□□ -0.04
RORAP35398 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.83□□□□□ -0.04
RORAP35398 AC134915.1-201ENST00000426461 574 ntBASIC14.83□□□□□ -0.04
RORAP35398 ACTG1P3-201ENST00000431775 1114 ntBASIC14.83□□□□□ -0.04
RORAP35398 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RORAP35398 ENPP7P5-201ENST00000541031 1031 ntBASIC14.83□□□□□ -0.04
RORAP35398 MIR5189-201ENST00000577370 114 ntBASIC14.83□□□□□ -0.04
RORAP35398 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.83□□□□□ -0.04
RORAP35398 BTNL10-201ENST00000595971 695 ntBASIC14.83□□□□□ -0.04
RORAP35398 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.83□□□□□ -0.04
RORAP35398 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RORAP35398 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RORAP35398 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.83□□□□□ -0.04
RORAP35398 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
RORAP35398 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.83□□□□□ -0.04
RORAP35398 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.83□□□□□ -0.04
RORAP35398 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.83□□□□□ -0.04
RORAP35398 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
RORAP35398 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
RORAP35398 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.83□□□□□ -0.04
RORAP35398 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.83□□□□□ -0.04
RORAP35398 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RORAP35398 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RORAP35398 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.82□□□□□ -0.04
RORAP35398 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.82□□□□□ -0.04
RORAP35398 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.82□□□□□ -0.04
RORAP35398 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RORAP35398 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RORAP35398 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.82□□□□□ -0.04
RORAP35398 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.82□□□□□ -0.04
RORAP35398 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.82□□□□□ -0.04
RORAP35398 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.82□□□□□ -0.04
RORAP35398 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
RORAP35398 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RORAP35398 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.82□□□□□ -0.04
RORAP35398 VDAC1P7-201ENST00000462417 847 ntBASIC14.82□□□□□ -0.04
RORAP35398 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.82□□□□□ -0.04
RORAP35398 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.82□□□□□ -0.04
RORAP35398 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.82□□□□□ -0.04
RORAP35398 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.82□□□□□ -0.04
RORAP35398 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.82□□□□□ -0.04
RORAP35398 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.82□□□□□ -0.04
RORAP35398 AC120045.2-201ENST00000567334 178 ntBASIC14.82□□□□□ -0.04
RORAP35398 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.82□□□□□ -0.04
RORAP35398 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.82□□□□□ -0.04
RORAP35398 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.82□□□□□ -0.04
RORAP35398 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.82□□□□□ -0.04
RORAP35398 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.82□□□□□ -0.04
RORAP35398 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.82□□□□□ -0.04
RORAP35398 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.82□□□□□ -0.04
RORAP35398 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.82□□□□□ -0.04
RORAP35398 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms