Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
COL8A2P25067 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
COL8A2P25067 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.18□□□□□ -0.3
COL8A2P25067 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 PRAL-201ENST00000624952 3286 ntBASIC13.18□□□□□ -0.3
COL8A2P25067 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
COL8A2P25067 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
COL8A2P25067 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
COL8A2P25067 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.18□□□□□ -0.3
COL8A2P25067 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.18□□□□□ -0.3
COL8A2P25067 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.18□□□□□ -0.3
COL8A2P25067 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.18□□□□□ -0.3
COL8A2P25067 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
COL8A2P25067 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
COL8A2P25067 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COL8A2P25067 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.17□□□□□ -0.3
COL8A2P25067 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.17□□□□□ -0.3
COL8A2P25067 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.17□□□□□ -0.3
COL8A2P25067 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
COL8A2P25067 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
COL8A2P25067 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.17□□□□□ -0.3
COL8A2P25067 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
COL8A2P25067 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 AC092384.3-202ENST00000564646 2873 ntBASIC13.17□□□□□ -0.3
COL8A2P25067 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
COL8A2P25067 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.17□□□□□ -0.3
COL8A2P25067 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 AC079776.1-201ENST00000401540 1152 ntBASIC13.17□□□□□ -0.3
COL8A2P25067 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.17□□□□□ -0.3
COL8A2P25067 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
COL8A2P25067 ACA64.2-201ENST00000459014 129 ntBASIC13.17□□□□□ -0.3
COL8A2P25067 RPL13AP25-201ENST00000484130 612 ntBASIC13.17□□□□□ -0.3
COL8A2P25067 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.17□□□□□ -0.3
COL8A2P25067 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.17□□□□□ -0.3
COL8A2P25067 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.17□□□□□ -0.3
COL8A2P25067 RAB43P1-201ENST00000561790 589 ntBASIC13.17□□□□□ -0.3
COL8A2P25067 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.17□□□□□ -0.3
COL8A2P25067 AC008735.3-201ENST00000596646 500 ntBASIC13.17□□□□□ -0.3
COL8A2P25067 AC000095.1-201ENST00000603208 874 ntBASIC13.17□□□□□ -0.3
COL8A2P25067 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.17□□□□□ -0.3
COL8A2P25067 RPSAP52-203ENST00000622976 1023 ntBASIC13.17□□□□□ -0.3
COL8A2P25067 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
COL8A2P25067 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COL8A2P25067 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.17□□□□□ -0.3
COL8A2P25067 INTS4P2-202ENST00000614726 2019 ntBASIC13.17□□□□□ -0.3
COL8A2P25067 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.16□□□□□ -0.3
COL8A2P25067 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.16□□□□□ -0.3
COL8A2P25067 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.16□□□□□ -0.3
COL8A2P25067 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.16□□□□□ -0.3
COL8A2P25067 AL162726.2-201ENST00000438986 1017 ntBASIC13.16□□□□□ -0.3
COL8A2P25067 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.16□□□□□ -0.3
COL8A2P25067 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.16□□□□□ -0.3
COL8A2P25067 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.16□□□□□ -0.3
COL8A2P25067 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 AC106886.1-201ENST00000568660 600 ntBASIC13.16□□□□□ -0.3
COL8A2P25067 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.16□□□□□ -0.3
COL8A2P25067 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.16□□□□□ -0.3
COL8A2P25067 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
COL8A2P25067 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.16□□□□□ -0.3
COL8A2P25067 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL8A2P25067 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms