Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX1P22670 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RFX1P22670 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
RFX1P22670 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX1P22670 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX1P22670 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RFX1P22670 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.99■□□□□ 0.31
RFX1P22670 RPL5P21-201ENST00000404620 815 ntBASIC16.99■□□□□ 0.31
RFX1P22670 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX1P22670 AC009477.1-201ENST00000452936 217 ntBASIC16.99■□□□□ 0.31
RFX1P22670 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.99■□□□□ 0.31
RFX1P22670 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX1P22670 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX1P22670 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.99■□□□□ 0.31
RFX1P22670 KRT17P8-201ENST00000540749 863 ntBASIC16.99■□□□□ 0.31
RFX1P22670 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX1P22670 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.99■□□□□ 0.31
RFX1P22670 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.99■□□□□ 0.31
RFX1P22670 AL162274.1-201ENST00000617191 1098 ntBASIC16.99■□□□□ 0.31
RFX1P22670 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
RFX1P22670 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.99■□□□□ 0.31
RFX1P22670 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RFX1P22670 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RFX1P22670 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 AL391825.1-201ENST00000457671 1364 ntBASIC16.99■□□□□ 0.31
RFX1P22670 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RFX1P22670 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RFX1P22670 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
RFX1P22670 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.99■□□□□ 0.31
RFX1P22670 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX1P22670 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX1P22670 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX1P22670 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX1P22670 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX1P22670 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX1P22670 SERBP1P3-201ENST00000459980 809 ntBASIC16.98■□□□□ 0.31
RFX1P22670 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.98■□□□□ 0.31
RFX1P22670 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.98■□□□□ 0.31
RFX1P22670 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX1P22670 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.98■□□□□ 0.31
RFX1P22670 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
RFX1P22670 AL079307.3-201ENST00000556114 283 ntBASIC16.98■□□□□ 0.31
RFX1P22670 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX1P22670 AC132938.2-201ENST00000579188 680 ntBASIC16.98■□□□□ 0.31
RFX1P22670 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.98■□□□□ 0.31
RFX1P22670 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.98■□□□□ 0.31
RFX1P22670 AL591163.1-201ENST00000641757 987 ntBASIC16.98■□□□□ 0.31
RFX1P22670 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX1P22670 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RFX1P22670 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
RFX1P22670 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RFX1P22670 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX1P22670 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX1P22670 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX1P22670 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX1P22670 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX1P22670 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
RFX1P22670 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
RFX1P22670 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX1P22670 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX1P22670 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RFX1P22670 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX1P22670 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX1P22670 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms