Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP2B1P20020 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
ATP2B1P20020 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B1P20020 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
ATP2B1P20020 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B1P20020 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B1P20020 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B1P20020 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP2B1P20020 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B1P20020 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B1P20020 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
ATP2B1P20020 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B1P20020 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP2B1P20020 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B1P20020 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B1P20020 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B1P20020 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ATP2B1P20020 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B1P20020 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B1P20020 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2B1P20020 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP2B1P20020 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B1P20020 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP2B1P20020 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B1P20020 C8orf49-201ENST00000525043 1968 ntBASIC18.02■□□□□ 0.48
ATP2B1P20020 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ATP2B1P20020 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B1P20020 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP2B1P20020 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B1P20020 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B1P20020 AC007326.2-201ENST00000624224 7579 ntBASIC18.02■□□□□ 0.48
ATP2B1P20020 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B1P20020 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.02■□□□□ 0.48
ATP2B1P20020 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.02■□□□□ 0.48
ATP2B1P20020 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B1P20020 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ATP2B1P20020 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B1P20020 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B1P20020 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B1P20020 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B1P20020 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.02■□□□□ 0.48
ATP2B1P20020 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.02■□□□□ 0.48
ATP2B1P20020 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B1P20020 RN7SL618P-201ENST00000477850 296 ntBASIC18.02■□□□□ 0.48
ATP2B1P20020 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP2B1P20020 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
ATP2B1P20020 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.02■□□□□ 0.48
ATP2B1P20020 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP2B1P20020 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
ATP2B1P20020 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.02■□□□□ 0.48
ATP2B1P20020 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.02■□□□□ 0.48
ATP2B1P20020 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.02■□□□□ 0.48
ATP2B1P20020 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B1P20020 AL390754.1-201ENST00000619088 582 ntBASIC18.02■□□□□ 0.48
ATP2B1P20020 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2B1P20020 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
ATP2B1P20020 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.02■□□□□ 0.47
ATP2B1P20020 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2B1P20020 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2B1P20020 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
ATP2B1P20020 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2B1P20020 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
ATP2B1P20020 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.02■□□□□ 0.47
ATP2B1P20020 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2B1P20020 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
ATP2B1P20020 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.02■□□□□ 0.47
ATP2B1P20020 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.02■□□□□ 0.47
ATP2B1P20020 AC138035.3-201ENST00000622706 2791 ntBASIC18.02■□□□□ 0.47
ATP2B1P20020 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.02■□□□□ 0.47
ATP2B1P20020 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2B1P20020 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2B1P20020 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
ATP2B1P20020 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP2B1P20020 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ATP2B1P20020 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 AC074338.1-201ENST00000416825 156 ntBASIC18.01■□□□□ 0.47
ATP2B1P20020 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 KRT18P64-201ENST00000434946 1219 ntBASIC18.01■□□□□ 0.47
ATP2B1P20020 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.01■□□□□ 0.47
ATP2B1P20020 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2B1P20020 CYMP-203ENST00000474680 1263 ntBASIC18.01■□□□□ 0.47
ATP2B1P20020 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.01■□□□□ 0.47
ATP2B1P20020 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.01■□□□□ 0.47
ATP2B1P20020 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.01■□□□□ 0.47
ATP2B1P20020 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.01■□□□□ 0.47
ATP2B1P20020 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms