Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ATF1P18846 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.75□□□□□ -0.21
ATF1P18846 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ATF1P18846 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ATF1P18846 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ATF1P18846 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.74□□□□□ -0.21
ATF1P18846 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.74□□□□□ -0.21
ATF1P18846 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
ATF1P18846 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ATF1P18846 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ATF1P18846 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ATF1P18846 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.74□□□□□ -0.21
ATF1P18846 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.74□□□□□ -0.21
ATF1P18846 AC142381.1-201ENST00000426099 345 ntBASIC13.74□□□□□ -0.21
ATF1P18846 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.74□□□□□ -0.21
ATF1P18846 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.74□□□□□ -0.21
ATF1P18846 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.74□□□□□ -0.21
ATF1P18846 SLC25A1P1-201ENST00000528351 927 ntBASIC13.74□□□□□ -0.21
ATF1P18846 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.74□□□□□ -0.21
ATF1P18846 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.74□□□□□ -0.21
ATF1P18846 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.74□□□□□ -0.21
ATF1P18846 BX640515.1-201ENST00000617215 977 ntBASIC13.74□□□□□ -0.21
ATF1P18846 AC091812.2-201ENST00000619081 385 ntBASIC13.74□□□□□ -0.21
ATF1P18846 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.74□□□□□ -0.21
ATF1P18846 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.74□□□□□ -0.21
ATF1P18846 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.74□□□□□ -0.21
ATF1P18846 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
ATF1P18846 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ATF1P18846 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.74□□□□□ -0.21
ATF1P18846 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.74□□□□□ -0.21
ATF1P18846 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 LINC01230-201ENST00000625222 3017 ntBASIC13.74□□□□□ -0.21
ATF1P18846 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.74□□□□□ -0.21
ATF1P18846 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ATF1P18846 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATF1P18846 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
ATF1P18846 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ATF1P18846 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.73□□□□□ -0.21
ATF1P18846 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.73□□□□□ -0.21
ATF1P18846 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.73□□□□□ -0.21
ATF1P18846 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.73□□□□□ -0.21
ATF1P18846 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.73□□□□□ -0.21
ATF1P18846 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.73□□□□□ -0.21
ATF1P18846 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.73□□□□□ -0.21
ATF1P18846 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
ATF1P18846 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.73□□□□□ -0.21
ATF1P18846 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
ATF1P18846 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
ATF1P18846 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.73□□□□□ -0.21
ATF1P18846 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
ATF1P18846 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.73□□□□□ -0.21
ATF1P18846 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 FAM220BP-201ENST00000377689 816 ntBASIC13.73□□□□□ -0.21
ATF1P18846 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
ATF1P18846 RPS8P6-201ENST00000426177 609 ntBASIC13.73□□□□□ -0.21
ATF1P18846 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.73□□□□□ -0.21
ATF1P18846 FAM58CP-201ENST00000435741 640 ntBASIC13.73□□□□□ -0.21
ATF1P18846 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ATF1P18846 FDX1P1-201ENST00000449115 551 ntBASIC13.73□□□□□ -0.21
ATF1P18846 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.73□□□□□ -0.21
ATF1P18846 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.73□□□□□ -0.21
ATF1P18846 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms