Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.75■□□□□ 0.11
VCLP18206 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.75■□□□□ 0.11
VCLP18206 AC134407.2-201ENST00000625089 1978 ntBASIC15.75■□□□□ 0.11
VCLP18206 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.75■□□□□ 0.11
VCLP18206 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
VCLP18206 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.75■□□□□ 0.11
VCLP18206 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.75■□□□□ 0.11
VCLP18206 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.75■□□□□ 0.11
VCLP18206 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.75■□□□□ 0.11
VCLP18206 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.75■□□□□ 0.11
VCLP18206 BCRP1-201ENST00000444246 691 ntBASIC15.75■□□□□ 0.11
VCLP18206 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.75■□□□□ 0.11
VCLP18206 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.75■□□□□ 0.11
VCLP18206 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.75■□□□□ 0.11
VCLP18206 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.75■□□□□ 0.11
VCLP18206 AL033527.5-202ENST00000641632 1098 ntBASIC15.75■□□□□ 0.11
VCLP18206 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
VCLP18206 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
VCLP18206 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
VCLP18206 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
VCLP18206 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VCLP18206 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
VCLP18206 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.75■□□□□ 0.11
VCLP18206 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.75■□□□□ 0.11
VCLP18206 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.75■□□□□ 0.11
VCLP18206 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
VCLP18206 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VCLP18206 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
VCLP18206 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
VCLP18206 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.74■□□□□ 0.11
VCLP18206 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
VCLP18206 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
VCLP18206 SSR4P1-203ENST00000599569 2260 ntBASIC15.74■□□□□ 0.11
VCLP18206 MIR600HG-201ENST00000449175 5984 ntBASIC15.74■□□□□ 0.11
VCLP18206 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.74■□□□□ 0.11
VCLP18206 AC005089.1-201ENST00000619486 2241 ntBASIC15.74■□□□□ 0.11
VCLP18206 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.74■□□□□ 0.11
VCLP18206 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VCLP18206 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.74■□□□□ 0.11
VCLP18206 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.74■□□□□ 0.11
VCLP18206 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.74■□□□□ 0.11
VCLP18206 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
VCLP18206 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.74■□□□□ 0.11
VCLP18206 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.74■□□□□ 0.11
VCLP18206 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.74■□□□□ 0.11
VCLP18206 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.74■□□□□ 0.11
VCLP18206 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.74■□□□□ 0.11
VCLP18206 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.74■□□□□ 0.11
VCLP18206 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.74■□□□□ 0.11
VCLP18206 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VCLP18206 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.74■□□□□ 0.11
VCLP18206 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VCLP18206 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.74■□□□□ 0.11
VCLP18206 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.74■□□□□ 0.11
VCLP18206 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.74■□□□□ 0.11
VCLP18206 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.74■□□□□ 0.11
VCLP18206 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.74■□□□□ 0.11
VCLP18206 KRT8P37-201ENST00000451609 1420 ntBASIC15.74■□□□□ 0.11
VCLP18206 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VCLP18206 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.74■□□□□ 0.11
VCLP18206 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
VCLP18206 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VCLP18206 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VCLP18206 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VCLP18206 AC022144.1-201ENST00000602255 1580 ntBASIC15.74■□□□□ 0.11
VCLP18206 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VCLP18206 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VCLP18206 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.74■□□□□ 0.11
VCLP18206 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.73■□□□□ 0.11
VCLP18206 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.73■□□□□ 0.11
VCLP18206 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
VCLP18206 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 C8orf49-201ENST00000525043 1968 ntBASIC15.73■□□□□ 0.11
VCLP18206 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
VCLP18206 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.73■□□□□ 0.11
VCLP18206 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms