Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PTPN1P18031 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.48■□□□□ 0.23
PTPN1P18031 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PTPN1P18031 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN1P18031 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN1P18031 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN1P18031 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN1P18031 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN1P18031 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.47■□□□□ 0.23
PTPN1P18031 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
PTPN1P18031 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN1P18031 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN1P18031 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN1P18031 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN1P18031 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN1P18031 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN1P18031 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.47■□□□□ 0.23
PTPN1P18031 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.47■□□□□ 0.23
PTPN1P18031 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.47■□□□□ 0.23
PTPN1P18031 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN1P18031 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN1P18031 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.47■□□□□ 0.23
PTPN1P18031 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.47■□□□□ 0.23
PTPN1P18031 RPSAP52-203ENST00000622976 1023 ntBASIC16.47■□□□□ 0.23
PTPN1P18031 AC020658.6-201ENST00000623564 1870 ntBASIC16.47■□□□□ 0.23
PTPN1P18031 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.47■□□□□ 0.23
PTPN1P18031 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PTPN1P18031 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
PTPN1P18031 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN1P18031 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN1P18031 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
PTPN1P18031 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN1P18031 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN1P18031 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN1P18031 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN1P18031 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN1P18031 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN1P18031 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN1P18031 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN1P18031 MST1L-201ENST00000442552 2185 ntBASIC16.47■□□□□ 0.23
PTPN1P18031 PKD1P5-201ENST00000532415 10291 ntBASIC16.47■□□□□ 0.23
PTPN1P18031 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN1P18031 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PTPN1P18031 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN1P18031 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN1P18031 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
PTPN1P18031 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN1P18031 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN1P18031 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN1P18031 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN1P18031 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN1P18031 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PTPN1P18031 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN1P18031 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PTPN1P18031 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN1P18031 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN1P18031 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.46■□□□□ 0.23
PTPN1P18031 AC007389.4-201ENST00000454674 793 ntBASIC16.46■□□□□ 0.23
PTPN1P18031 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN1P18031 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.46■□□□□ 0.23
PTPN1P18031 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN1P18031 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.46■□□□□ 0.23
PTPN1P18031 AC010319.3-201ENST00000597028 470 ntBASIC16.46■□□□□ 0.23
PTPN1P18031 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN1P18031 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN1P18031 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PTPN1P18031 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN1P18031 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN1P18031 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN1P18031 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN1P18031 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN1P18031 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PTPN1P18031 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN1P18031 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PTPN1P18031 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN1P18031 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN1P18031 AC105917.1-201ENST00000506637 2539 ntBASIC16.46■□□□□ 0.22
PTPN1P18031 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PTPN1P18031 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.46■□□□□ 0.22
PTPN1P18031 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.46■□□□□ 0.22
PTPN1P18031 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN1P18031 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN1P18031 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN1P18031 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN1P18031 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN1P18031 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PTPN1P18031 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN1P18031 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN1P18031 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.45■□□□□ 0.22
PTPN1P18031 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN1P18031 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.45■□□□□ 0.22
PTPN1P18031 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN1P18031 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms