Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.77□□□□□ -0.37
DEFA4P12838 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.77□□□□□ -0.37
DEFA4P12838 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.77□□□□□ -0.37
DEFA4P12838 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.77□□□□□ -0.37
DEFA4P12838 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.77□□□□□ -0.37
DEFA4P12838 SPTSSB-204ENST00000617024 1292 ntBASIC12.77□□□□□ -0.37
DEFA4P12838 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
DEFA4P12838 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA4P12838 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA4P12838 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.77□□□□□ -0.37
DEFA4P12838 CICP23-201ENST00000605013 2741 ntBASIC12.77□□□□□ -0.37
DEFA4P12838 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA4P12838 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
DEFA4P12838 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.77□□□□□ -0.37
DEFA4P12838 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.77□□□□□ -0.37
DEFA4P12838 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
DEFA4P12838 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA4P12838 AC008677.1-201ENST00000519230 1561 ntBASIC12.77□□□□□ -0.37
DEFA4P12838 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA4P12838 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.77□□□□□ -0.37
DEFA4P12838 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA4P12838 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA4P12838 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA4P12838 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
DEFA4P12838 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
DEFA4P12838 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
DEFA4P12838 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
DEFA4P12838 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.76□□□□□ -0.37
DEFA4P12838 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
DEFA4P12838 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA4P12838 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
DEFA4P12838 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 AC009090.5-201ENST00000624886 2285 ntBASIC12.76□□□□□ -0.37
DEFA4P12838 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA4P12838 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.76□□□□□ -0.37
DEFA4P12838 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA4P12838 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA4P12838 AL355306.1-201ENST00000415580 579 ntBASIC12.76□□□□□ -0.37
DEFA4P12838 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.76□□□□□ -0.37
DEFA4P12838 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 RNA5SP410-201ENST00000516285 106 ntBASIC12.76□□□□□ -0.37
DEFA4P12838 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA4P12838 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
DEFA4P12838 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA4P12838 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.76□□□□□ -0.37
DEFA4P12838 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA4P12838 AC027307.2-201ENST00000591252 911 ntBASIC12.76□□□□□ -0.37
DEFA4P12838 AC099522.2-201ENST00000607001 744 ntBASIC12.76□□□□□ -0.37
DEFA4P12838 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
DEFA4P12838 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA4P12838 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA4P12838 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
DEFA4P12838 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA4P12838 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
DEFA4P12838 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 PEG13-201ENST00000631594 5667 ntBASIC12.76□□□□□ -0.37
DEFA4P12838 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA4P12838 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
DEFA4P12838 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
DEFA4P12838 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA4P12838 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
DEFA4P12838 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
DEFA4P12838 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA4P12838 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
DEFA4P12838 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
DEFA4P12838 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
DEFA4P12838 ST20-AS1-201ENST00000560255 4223 ntBASIC12.75□□□□□ -0.37
DEFA4P12838 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
DEFA4P12838 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.75□□□□□ -0.37
DEFA4P12838 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.75□□□□□ -0.37
DEFA4P12838 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.75□□□□□ -0.37
DEFA4P12838 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 YBX2P1-201ENST00000394192 760 ntBASIC12.75□□□□□ -0.37
DEFA4P12838 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms