Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.38□□□□□ -0.11
THBS1P07996 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.38□□□□□ -0.11
THBS1P07996 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
THBS1P07996 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 RPL13P2-201ENST00000440687 659 ntBASIC14.38□□□□□ -0.11
THBS1P07996 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.38□□□□□ -0.11
THBS1P07996 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.38□□□□□ -0.11
THBS1P07996 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 AC074044.1-201ENST00000609673 707 ntBASIC14.38□□□□□ -0.11
THBS1P07996 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.38□□□□□ -0.11
THBS1P07996 AC093512.1-201ENST00000617969 520 ntBASIC14.38□□□□□ -0.11
THBS1P07996 AC005786.4-201ENST00000623369 682 ntBASIC14.38□□□□□ -0.11
THBS1P07996 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.38□□□□□ -0.11
THBS1P07996 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.38□□□□□ -0.11
THBS1P07996 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
THBS1P07996 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
THBS1P07996 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.38□□□□□ -0.11
THBS1P07996 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
THBS1P07996 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.38□□□□□ -0.11
THBS1P07996 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.38□□□□□ -0.11
THBS1P07996 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.37□□□□□ -0.11
THBS1P07996 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
THBS1P07996 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
THBS1P07996 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
THBS1P07996 ZBED1P1-201ENST00000502364 1930 ntBASIC14.37□□□□□ -0.11
THBS1P07996 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.37□□□□□ -0.11
THBS1P07996 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.37□□□□□ -0.11
THBS1P07996 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
THBS1P07996 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.37□□□□□ -0.11
THBS1P07996 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.37□□□□□ -0.11
THBS1P07996 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.37□□□□□ -0.11
THBS1P07996 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.37□□□□□ -0.11
THBS1P07996 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 GHSR-202ENST00000427970 912 ntBASIC14.37□□□□□ -0.11
THBS1P07996 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.37□□□□□ -0.11
THBS1P07996 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.37□□□□□ -0.11
THBS1P07996 RN7SL618P-201ENST00000477850 296 ntBASIC14.37□□□□□ -0.11
THBS1P07996 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.37□□□□□ -0.11
THBS1P07996 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.37□□□□□ -0.11
THBS1P07996 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.37□□□□□ -0.11
THBS1P07996 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.37□□□□□ -0.11
THBS1P07996 AC005498.2-205ENST00000593218 784 ntBASIC14.37□□□□□ -0.11
THBS1P07996 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC14.37□□□□□ -0.11
THBS1P07996 AC073592.8-201ENST00000624126 511 ntBASIC14.37□□□□□ -0.11
THBS1P07996 Z92544.3-201ENST00000624747 417 ntBASIC14.37□□□□□ -0.11
THBS1P07996 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.37□□□□□ -0.11
THBS1P07996 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.37□□□□□ -0.11
THBS1P07996 AL645728.2-202ENST00000641679 227 ntBASIC14.37□□□□□ -0.11
THBS1P07996 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.37□□□□□ -0.11
THBS1P07996 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
THBS1P07996 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.37□□□□□ -0.11
THBS1P07996 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.37□□□□□ -0.11
THBS1P07996 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
THBS1P07996 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
THBS1P07996 TUBB3P1-201ENST00000405796 1332 ntBASIC14.37□□□□□ -0.11
THBS1P07996 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.37□□□□□ -0.11
THBS1P07996 AC023824.1-201ENST00000562945 2975 ntBASIC14.37□□□□□ -0.11
THBS1P07996 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
THBS1P07996 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.36□□□□□ -0.11
THBS1P07996 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.36□□□□□ -0.11
THBS1P07996 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
THBS1P07996 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.36□□□□□ -0.11
THBS1P07996 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms