Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.56■□□□□ 0.4
TPM3P06753 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 CRYGEP-201ENST00000412192 528 ntBASIC17.56■□□□□ 0.4
TPM3P06753 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.56■□□□□ 0.4
TPM3P06753 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.56■□□□□ 0.4
TPM3P06753 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.56■□□□□ 0.4
TPM3P06753 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.56■□□□□ 0.4
TPM3P06753 AC024267.1-201ENST00000582320 895 ntBASIC17.56■□□□□ 0.4
TPM3P06753 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
TPM3P06753 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TPM3P06753 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.56■□□□□ 0.4
TPM3P06753 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
TPM3P06753 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.56■□□□□ 0.4
TPM3P06753 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TPM3P06753 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TPM3P06753 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.55■□□□□ 0.4
TPM3P06753 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TPM3P06753 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.55■□□□□ 0.4
TPM3P06753 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TPM3P06753 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.55■□□□□ 0.4
TPM3P06753 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.55■□□□□ 0.4
TPM3P06753 HNRNPDP1-201ENST00000439535 754 ntBASIC17.55■□□□□ 0.4
TPM3P06753 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.55■□□□□ 0.4
TPM3P06753 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.55■□□□□ 0.4
TPM3P06753 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.55■□□□□ 0.4
TPM3P06753 AC096734.2-201ENST00000562054 433 ntBASIC17.55■□□□□ 0.4
TPM3P06753 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.55■□□□□ 0.4
TPM3P06753 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.55■□□□□ 0.4
TPM3P06753 AL445228.2-201ENST00000605589 952 ntBASIC17.55■□□□□ 0.4
TPM3P06753 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.55■□□□□ 0.4
TPM3P06753 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TPM3P06753 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.55■□□□□ 0.4
TPM3P06753 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
TPM3P06753 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
TPM3P06753 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 WASH3P-207ENST00000560956 1394 ntBASIC17.54■□□□□ 0.4
TPM3P06753 FO538757.1-201ENST00000623083 1397 ntBASIC17.54■□□□□ 0.4
TPM3P06753 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.54■□□□□ 0.4
TPM3P06753 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.54■□□□□ 0.4
TPM3P06753 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TPM3P06753 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.54■□□□□ 0.4
TPM3P06753 AC140658.5-201ENST00000438532 169 ntBASIC17.54■□□□□ 0.4
TPM3P06753 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.54■□□□□ 0.4
TPM3P06753 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.54■□□□□ 0.4
TPM3P06753 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.54■□□□□ 0.4
TPM3P06753 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.54■□□□□ 0.4
TPM3P06753 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.54■□□□□ 0.4
TPM3P06753 AC023141.13-201ENST00000604991 943 ntBASIC17.54■□□□□ 0.4
TPM3P06753 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.54■□□□□ 0.4
TPM3P06753 AL161645.1-201ENST00000622716 1255 ntBASIC17.54■□□□□ 0.4
TPM3P06753 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.54■□□□□ 0.4
TPM3P06753 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.54■□□□□ 0.4
TPM3P06753 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TPM3P06753 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms