Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.99□□□□□ -0.17
APOA1P02647 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.99□□□□□ -0.17
APOA1P02647 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
APOA1P02647 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.99□□□□□ -0.17
APOA1P02647 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.99□□□□□ -0.17
APOA1P02647 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.99□□□□□ -0.17
APOA1P02647 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
APOA1P02647 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
APOA1P02647 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.99□□□□□ -0.17
APOA1P02647 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.99□□□□□ -0.17
APOA1P02647 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.99□□□□□ -0.17
APOA1P02647 AC087499.1-201ENST00000418141 1075 ntBASIC13.99□□□□□ -0.17
APOA1P02647 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.99□□□□□ -0.17
APOA1P02647 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 AC005412.3-201ENST00000580309 715 ntBASIC13.99□□□□□ -0.17
APOA1P02647 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.99□□□□□ -0.17
APOA1P02647 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.99□□□□□ -0.17
APOA1P02647 AC064862.7-201ENST00000604520 867 ntBASIC13.99□□□□□ -0.17
APOA1P02647 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.99□□□□□ -0.17
APOA1P02647 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.99□□□□□ -0.17
APOA1P02647 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.99□□□□□ -0.17
APOA1P02647 AC005363.2-201ENST00000618631 242 ntBASIC13.99□□□□□ -0.17
APOA1P02647 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
APOA1P02647 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.99□□□□□ -0.17
APOA1P02647 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.99□□□□□ -0.17
APOA1P02647 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.99□□□□□ -0.17
APOA1P02647 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.99□□□□□ -0.17
APOA1P02647 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 AC092135.3-201ENST00000624151 1846 ntBASIC13.99□□□□□ -0.17
APOA1P02647 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
APOA1P02647 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA1P02647 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.98□□□□□ -0.17
APOA1P02647 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
APOA1P02647 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.98□□□□□ -0.17
APOA1P02647 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.98□□□□□ -0.17
APOA1P02647 CR383656.2-201ENST00000548656 2254 ntBASIC13.98□□□□□ -0.17
APOA1P02647 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.98□□□□□ -0.17
APOA1P02647 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.98□□□□□ -0.17
APOA1P02647 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.98□□□□□ -0.17
APOA1P02647 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.98□□□□□ -0.17
APOA1P02647 AC245100.5-201ENST00000452108 331 ntBASIC13.98□□□□□ -0.17
APOA1P02647 AL671277.2-201ENST00000458060 996 ntBASIC13.98□□□□□ -0.17
APOA1P02647 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.98□□□□□ -0.17
APOA1P02647 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.98□□□□□ -0.17
APOA1P02647 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.98□□□□□ -0.17
APOA1P02647 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
APOA1P02647 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.98□□□□□ -0.17
APOA1P02647 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.98□□□□□ -0.17
APOA1P02647 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
APOA1P02647 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.98□□□□□ -0.17
APOA1P02647 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.98□□□□□ -0.17
APOA1P02647 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.98□□□□□ -0.17
APOA1P02647 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.98□□□□□ -0.17
APOA1P02647 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.98□□□□□ -0.17
APOA1P02647 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.98□□□□□ -0.17
APOA1P02647 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
APOA1P02647 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.98□□□□□ -0.17
APOA1P02647 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.98□□□□□ -0.17
APOA1P02647 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
APOA1P02647 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOA1P02647 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms