Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 AC211476.1-201ENST00000503899 468 ntBASIC15.17■□□□□ 0.02
KRT6AP02538 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT6AP02538 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT6AP02538 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
KRT6AP02538 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT6AP02538 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT6AP02538 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT6AP02538 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 AL133215.2-201ENST00000609242 977 ntBASIC15.17■□□□□ 0.02
KRT6AP02538 MIR6080-201ENST00000617359 66 ntBASIC15.17■□□□□ 0.02
KRT6AP02538 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
KRT6AP02538 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
KRT6AP02538 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT6AP02538 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.17■□□□□ 0.02
KRT6AP02538 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6AP02538 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
KRT6AP02538 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT6AP02538 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT6AP02538 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT6AP02538 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
KRT6AP02538 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT6AP02538 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT6AP02538 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
KRT6AP02538 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT6AP02538 HIST3H2BA-201ENST00000436555 524 ntBASIC15.16■□□□□ 0.02
KRT6AP02538 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT6AP02538 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.16■□□□□ 0.02
KRT6AP02538 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT6AP02538 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT6AP02538 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.16■□□□□ 0.02
KRT6AP02538 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
KRT6AP02538 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.16■□□□□ 0.02
KRT6AP02538 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT6AP02538 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT6AP02538 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT6AP02538 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6AP02538 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
KRT6AP02538 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6AP02538 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6AP02538 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6AP02538 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT6AP02538 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.15■□□□□ 0.02
KRT6AP02538 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.15■□□□□ 0.02
KRT6AP02538 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.15■□□□□ 0.02
KRT6AP02538 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT6AP02538 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT6AP02538 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6AP02538 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms