Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RAPGEF3O95398 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC22.8■■□□□ 1.24
RAPGEF3O95398 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
RAPGEF3O95398 AC078875.1-201ENST00000431907 724 ntBASIC22.8■■□□□ 1.24
RAPGEF3O95398 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC22.8■■□□□ 1.24
RAPGEF3O95398 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC22.8■■□□□ 1.24
RAPGEF3O95398 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
RAPGEF3O95398 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC22.8■■□□□ 1.24
RAPGEF3O95398 NAT9-220ENST00000582870 896 ntTSL 5 BASIC22.8■■□□□ 1.24
RAPGEF3O95398 AC005962.1-201ENST00000584100 773 ntBASIC22.8■■□□□ 1.24
RAPGEF3O95398 MIR4522-201ENST00000584932 87 ntBASIC22.8■■□□□ 1.24
RAPGEF3O95398 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC22.8■■□□□ 1.24
RAPGEF3O95398 AL157813.1-201ENST00000612996 587 ntBASIC22.8■■□□□ 1.24
RAPGEF3O95398 AC073911.3-201ENST00000624401 631 ntBASIC22.8■■□□□ 1.24
RAPGEF3O95398 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
RAPGEF3O95398 AC084364.1-201ENST00000551967 1556 ntBASIC22.8■■□□□ 1.24
RAPGEF3O95398 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF3O95398 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC22.79■■□□□ 1.24
RAPGEF3O95398 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC22.79■■□□□ 1.24
RAPGEF3O95398 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF3O95398 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF3O95398 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF3O95398 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC22.79■■□□□ 1.24
RAPGEF3O95398 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF3O95398 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
RAPGEF3O95398 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF3O95398 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC22.79■■□□□ 1.24
RAPGEF3O95398 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF3O95398 AC012441.2-201ENST00000444843 739 ntBASIC22.79■■□□□ 1.24
RAPGEF3O95398 LYPLA2P1-203ENST00000447689 696 ntBASIC22.79■■□□□ 1.24
RAPGEF3O95398 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC22.79■■□□□ 1.24
RAPGEF3O95398 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF3O95398 AC025262.2-201ENST00000623975 1056 ntBASIC22.79■■□□□ 1.24
RAPGEF3O95398 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF3O95398 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
RAPGEF3O95398 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF3O95398 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF3O95398 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF3O95398 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF3O95398 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RAPGEF3O95398 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RAPGEF3O95398 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RAPGEF3O95398 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
RAPGEF3O95398 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RAPGEF3O95398 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RAPGEF3O95398 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC22.78■■□□□ 1.24
RAPGEF3O95398 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RAPGEF3O95398 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC22.78■■□□□ 1.24
RAPGEF3O95398 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RAPGEF3O95398 RBM38-204ENST00000371219 760 ntTSL 2 BASIC22.78■■□□□ 1.24
RAPGEF3O95398 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC22.78■■□□□ 1.24
RAPGEF3O95398 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC22.78■■□□□ 1.24
RAPGEF3O95398 AL592076.1-201ENST00000424448 303 ntBASIC22.78■■□□□ 1.24
RAPGEF3O95398 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC22.78■■□□□ 1.24
RAPGEF3O95398 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
RAPGEF3O95398 CDC23-208ENST00000505120 455 ntTSL 3 BASIC22.78■■□□□ 1.24
RAPGEF3O95398 MIR5196-201ENST00000578146 115 ntBASIC22.78■■□□□ 1.24
RAPGEF3O95398 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC22.78■■□□□ 1.24
RAPGEF3O95398 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
RAPGEF3O95398 MIR6769A-201ENST00000617340 73 ntBASIC22.78■■□□□ 1.24
RAPGEF3O95398 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC22.78■■□□□ 1.24
RAPGEF3O95398 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RAPGEF3O95398 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
RAPGEF3O95398 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RAPGEF3O95398 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
RAPGEF3O95398 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC22.77■■□□□ 1.24
RAPGEF3O95398 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RAPGEF3O95398 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RAPGEF3O95398 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RAPGEF3O95398 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RAPGEF3O95398 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC22.77■■□□□ 1.24
RAPGEF3O95398 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
RAPGEF3O95398 CCNC-217ENST00000523985 958 ntTSL 2 BASIC22.77■■□□□ 1.24
RAPGEF3O95398 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC22.77■■□□□ 1.24
RAPGEF3O95398 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC22.77■■□□□ 1.24
RAPGEF3O95398 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RAPGEF3O95398 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC22.77■■□□□ 1.24
RAPGEF3O95398 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC22.77■■□□□ 1.24
RAPGEF3O95398 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RAPGEF3O95398 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC22.77■■□□□ 1.23
RAPGEF3O95398 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC22.76■■□□□ 1.23
RAPGEF3O95398 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
RAPGEF3O95398 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC22.76■■□□□ 1.23
RAPGEF3O95398 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RAPGEF3O95398 Z69890.1-201ENST00000382990 339 ntBASIC22.76■■□□□ 1.23
RAPGEF3O95398 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
RAPGEF3O95398 PHBP15-201ENST00000574228 665 ntBASIC22.76■■□□□ 1.23
RAPGEF3O95398 EIF5AP2-201ENST00000585668 1047 ntBASIC22.76■■□□□ 1.23
RAPGEF3O95398 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
RAPGEF3O95398 HPN-206ENST00000597419 1212 ntTSL 5 BASIC22.76■■□□□ 1.23
RAPGEF3O95398 AC138696.2-201ENST00000607376 223 ntBASIC22.76■■□□□ 1.23
RAPGEF3O95398 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
RAPGEF3O95398 AC005618.3-201ENST00000624928 458 ntBASIC22.76■■□□□ 1.23
RAPGEF3O95398 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC22.76■■□□□ 1.23
RAPGEF3O95398 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RAPGEF3O95398 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
RAPGEF3O95398 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RAPGEF3O95398 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
RAPGEF3O95398 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC22.76■■□□□ 1.23
RAPGEF3O95398 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms