Protein–RNA interactions for Protein: O76075

DFFB, DNA fragmentation factor subunit beta, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFBO76075 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
DFFBO76075 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.8□□□□□ -0.36
DFFBO76075 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
DFFBO76075 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
DFFBO76075 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.8□□□□□ -0.36
DFFBO76075 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
DFFBO76075 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
DFFBO76075 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 MRPL3P1-201ENST00000400109 1033 ntBASIC12.8□□□□□ -0.36
DFFBO76075 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
DFFBO76075 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.8□□□□□ -0.36
DFFBO76075 AL645939.2-201ENST00000427340 991 ntBASIC12.8□□□□□ -0.36
DFFBO76075 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.8□□□□□ -0.36
DFFBO76075 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
DFFBO76075 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.8□□□□□ -0.36
DFFBO76075 IGHV3-65-201ENST00000523210 341 ntBASIC12.8□□□□□ -0.36
DFFBO76075 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.8□□□□□ -0.36
DFFBO76075 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
DFFBO76075 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.8□□□□□ -0.36
DFFBO76075 AL049840.3-201ENST00000602669 611 ntBASIC12.8□□□□□ -0.36
DFFBO76075 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.8□□□□□ -0.36
DFFBO76075 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.8□□□□□ -0.36
DFFBO76075 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.8□□□□□ -0.36
DFFBO76075 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
DFFBO76075 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.8□□□□□ -0.36
DFFBO76075 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
DFFBO76075 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.8□□□□□ -0.36
DFFBO76075 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 ZBED1P1-201ENST00000502364 1930 ntBASIC12.8□□□□□ -0.36
DFFBO76075 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DFFBO76075 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
DFFBO76075 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.79□□□□□ -0.36
DFFBO76075 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.79□□□□□ -0.36
DFFBO76075 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
DFFBO76075 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
DFFBO76075 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.79□□□□□ -0.36
DFFBO76075 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 PEG13-201ENST00000631594 5667 ntBASIC12.79□□□□□ -0.36
DFFBO76075 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.79□□□□□ -0.36
DFFBO76075 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
DFFBO76075 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
DFFBO76075 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.79□□□□□ -0.36
DFFBO76075 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.79□□□□□ -0.36
DFFBO76075 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
DFFBO76075 FAM8A3P-201ENST00000427218 844 ntBASIC12.79□□□□□ -0.36
DFFBO76075 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.79□□□□□ -0.36
DFFBO76075 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.79□□□□□ -0.36
DFFBO76075 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.79□□□□□ -0.36
DFFBO76075 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.79□□□□□ -0.36
DFFBO76075 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.79□□□□□ -0.36
DFFBO76075 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.79□□□□□ -0.36
DFFBO76075 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.79□□□□□ -0.36
DFFBO76075 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.79□□□□□ -0.36
DFFBO76075 AP001005.1-201ENST00000571755 1248 ntBASIC12.79□□□□□ -0.36
DFFBO76075 AC117500.6-201ENST00000624871 588 ntBASIC12.79□□□□□ -0.36
DFFBO76075 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
DFFBO76075 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.79□□□□□ -0.36
DFFBO76075 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DFFBO76075 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.79□□□□□ -0.36
DFFBO76075 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms