Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.63□□□□□ -0.07
TRIM3O75382 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.63□□□□□ -0.07
TRIM3O75382 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.63□□□□□ -0.07
TRIM3O75382 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.63□□□□□ -0.07
TRIM3O75382 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.63□□□□□ -0.07
TRIM3O75382 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.63□□□□□ -0.07
TRIM3O75382 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRIM3O75382 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 CDC14C-201ENST00000428251 1719 ntBASIC14.63□□□□□ -0.07
TRIM3O75382 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.63□□□□□ -0.07
TRIM3O75382 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRIM3O75382 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.63□□□□□ -0.07
TRIM3O75382 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRIM3O75382 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRIM3O75382 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRIM3O75382 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM3O75382 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM3O75382 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM3O75382 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRIM3O75382 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.62□□□□□ -0.07
TRIM3O75382 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM3O75382 SBF1P1-201ENST00000444527 5631 ntBASIC14.62□□□□□ -0.07
TRIM3O75382 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM3O75382 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM3O75382 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM3O75382 AC236430.1-201ENST00000402231 743 ntBASIC14.62□□□□□ -0.07
TRIM3O75382 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.62□□□□□ -0.07
TRIM3O75382 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM3O75382 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRIM3O75382 HIST3H2BA-201ENST00000436555 524 ntBASIC14.62□□□□□ -0.07
TRIM3O75382 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.62□□□□□ -0.07
TRIM3O75382 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM3O75382 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM3O75382 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM3O75382 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.62□□□□□ -0.07
TRIM3O75382 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM3O75382 LINC02084-201ENST00000606069 1096 ntBASIC14.62□□□□□ -0.07
TRIM3O75382 AC008738.7-201ENST00000609744 511 ntBASIC14.62□□□□□ -0.07
TRIM3O75382 MIR6069-201ENST00000620069 79 ntBASIC14.62□□□□□ -0.07
TRIM3O75382 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.62□□□□□ -0.07
TRIM3O75382 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM3O75382 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRIM3O75382 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM3O75382 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
TRIM3O75382 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRIM3O75382 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRIM3O75382 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM3O75382 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRIM3O75382 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM3O75382 AP001282.1-201ENST00000531301 1499 ntBASIC14.62□□□□□ -0.07
TRIM3O75382 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM3O75382 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM3O75382 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM3O75382 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM3O75382 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRIM3O75382 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM3O75382 AC007292.2-201ENST00000593524 1812 ntBASIC14.62□□□□□ -0.07
TRIM3O75382 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM3O75382 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRIM3O75382 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM3O75382 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM3O75382 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
TRIM3O75382 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRIM3O75382 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TRIM3O75382 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM3O75382 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRIM3O75382 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM3O75382 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM3O75382 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM3O75382 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRIM3O75382 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM3O75382 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM3O75382 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM3O75382 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
TRIM3O75382 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
TRIM3O75382 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM3O75382 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM3O75382 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM3O75382 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM3O75382 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM3O75382 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM3O75382 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM3O75382 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM3O75382 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM3O75382 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM3O75382 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM3O75382 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM3O75382 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.61□□□□□ -0.07
TRIM3O75382 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms