Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.95□□□□□ -0.18
CXCL13O43927 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CXCL13O43927 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.94□□□□□ -0.18
CXCL13O43927 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.94□□□□□ -0.18
CXCL13O43927 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.94□□□□□ -0.18
CXCL13O43927 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.94□□□□□ -0.18
CXCL13O43927 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
CXCL13O43927 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 AC134915.1-201ENST00000426461 574 ntBASIC13.94□□□□□ -0.18
CXCL13O43927 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CXCL13O43927 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.94□□□□□ -0.18
CXCL13O43927 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.94□□□□□ -0.18
CXCL13O43927 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.94□□□□□ -0.18
CXCL13O43927 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.94□□□□□ -0.18
CXCL13O43927 RPL13AP25-201ENST00000484130 612 ntBASIC13.94□□□□□ -0.18
CXCL13O43927 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.94□□□□□ -0.18
CXCL13O43927 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CXCL13O43927 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.94□□□□□ -0.18
CXCL13O43927 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.94□□□□□ -0.18
CXCL13O43927 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.94□□□□□ -0.18
CXCL13O43927 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.94□□□□□ -0.18
CXCL13O43927 AC084364.1-201ENST00000551967 1556 ntBASIC13.94□□□□□ -0.18
CXCL13O43927 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.94□□□□□ -0.18
CXCL13O43927 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CXCL13O43927 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.94□□□□□ -0.18
CXCL13O43927 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CXCL13O43927 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CXCL13O43927 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.94□□□□□ -0.18
CXCL13O43927 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.94□□□□□ -0.18
CXCL13O43927 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.94□□□□□ -0.18
CXCL13O43927 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.94□□□□□ -0.18
CXCL13O43927 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CXCL13O43927 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CXCL13O43927 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CXCL13O43927 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.94□□□□□ -0.18
CXCL13O43927 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CXCL13O43927 AC090616.6-203ENST00000579186 1945 ntBASIC13.94□□□□□ -0.18
CXCL13O43927 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CXCL13O43927 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CXCL13O43927 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.93□□□□□ -0.18
CXCL13O43927 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.93□□□□□ -0.18
CXCL13O43927 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CXCL13O43927 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.93□□□□□ -0.18
CXCL13O43927 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.93□□□□□ -0.18
CXCL13O43927 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
CXCL13O43927 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.93□□□□□ -0.18
CXCL13O43927 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.93□□□□□ -0.18
CXCL13O43927 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.93□□□□□ -0.18
CXCL13O43927 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.93□□□□□ -0.18
CXCL13O43927 AL442647.2-201ENST00000429864 857 ntBASIC13.93□□□□□ -0.18
CXCL13O43927 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CXCL13O43927 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.93□□□□□ -0.18
CXCL13O43927 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.93□□□□□ -0.18
CXCL13O43927 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.93□□□□□ -0.18
CXCL13O43927 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.93□□□□□ -0.18
CXCL13O43927 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.93□□□□□ -0.18
CXCL13O43927 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.93□□□□□ -0.18
CXCL13O43927 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.93□□□□□ -0.18
CXCL13O43927 AL359711.2-201ENST00000563105 872 ntBASIC13.93□□□□□ -0.18
CXCL13O43927 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.93□□□□□ -0.18
CXCL13O43927 AC133539.2-201ENST00000604757 467 ntBASIC13.93□□□□□ -0.18
CXCL13O43927 AC025181.2-201ENST00000606994 802 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms