Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.96■■□□□ 1.11
MSH5O43196 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
MSH5O43196 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC21.96■■□□□ 1.11
MSH5O43196 RN7SL589P-201ENST00000481268 310 ntBASIC21.96■■□□□ 1.11
MSH5O43196 GTF2IP9-201ENST00000502460 301 ntBASIC21.96■■□□□ 1.11
MSH5O43196 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
MSH5O43196 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.96■■□□□ 1.11
MSH5O43196 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.96■■□□□ 1.11
MSH5O43196 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MSH5O43196 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC21.96■■□□□ 1.11
MSH5O43196 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC21.96■■□□□ 1.11
MSH5O43196 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC21.96■■□□□ 1.11
MSH5O43196 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.96■■□□□ 1.11
MSH5O43196 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MSH5O43196 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC21.96■■□□□ 1.11
MSH5O43196 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MSH5O43196 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
MSH5O43196 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MSH5O43196 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MSH5O43196 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
MSH5O43196 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MSH5O43196 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
MSH5O43196 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
MSH5O43196 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MSH5O43196 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MSH5O43196 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MSH5O43196 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
MSH5O43196 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
MSH5O43196 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
MSH5O43196 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC21.96■■□□□ 1.11
MSH5O43196 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC21.96■■□□□ 1.11
MSH5O43196 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MSH5O43196 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
MSH5O43196 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
MSH5O43196 AC008677.1-201ENST00000519230 1561 ntBASIC21.95■■□□□ 1.11
MSH5O43196 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
MSH5O43196 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MSH5O43196 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSH5O43196 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MSH5O43196 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSH5O43196 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
MSH5O43196 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC21.95■■□□□ 1.1
MSH5O43196 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC21.95■■□□□ 1.1
MSH5O43196 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC21.95■■□□□ 1.1
MSH5O43196 GTF3AP1-201ENST00000416942 1004 ntBASIC21.95■■□□□ 1.1
MSH5O43196 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.95■■□□□ 1.1
MSH5O43196 TMPRSS11GP-201ENST00000431070 1204 ntBASIC21.95■■□□□ 1.1
MSH5O43196 ZNF277-206ENST00000450657 1075 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MSH5O43196 AC023161.2-201ENST00000551218 780 ntBASIC21.95■■□□□ 1.1
MSH5O43196 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC21.95■■□□□ 1.1
MSH5O43196 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.95■■□□□ 1.1
MSH5O43196 AC243562.1-201ENST00000560672 389 ntBASIC21.95■■□□□ 1.1
MSH5O43196 AL135744.1-201ENST00000565098 629 ntBASIC21.95■■□□□ 1.1
MSH5O43196 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSH5O43196 AL359513.1-201ENST00000614364 557 ntBASIC21.95■■□□□ 1.1
MSH5O43196 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.95■■□□□ 1.1
MSH5O43196 AL358472.5-202ENST00000641448 1267 ntBASIC21.95■■□□□ 1.1
MSH5O43196 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSH5O43196 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
MSH5O43196 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSH5O43196 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSH5O43196 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSH5O43196 RSRC1-202ENST00000312179 1443 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MSH5O43196 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSH5O43196 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSH5O43196 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
MSH5O43196 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSH5O43196 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC21.95■■□□□ 1.1
MSH5O43196 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MSH5O43196 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
MSH5O43196 AC130448.1-201ENST00000624179 1733 ntBASIC21.94■■□□□ 1.1
MSH5O43196 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MSH5O43196 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
MSH5O43196 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MSH5O43196 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.94■■□□□ 1.1
MSH5O43196 FES-204ENST00000414248 2327 ntTSL 2 BASIC21.94■■□□□ 1.1
MSH5O43196 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
MSH5O43196 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MSH5O43196 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MSH5O43196 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MSH5O43196 FCRLA-203ENST00000309691 901 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MSH5O43196 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.94■■□□□ 1.1
MSH5O43196 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
MSH5O43196 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MSH5O43196 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
MSH5O43196 AL049697.3-201ENST00000406493 982 ntBASIC21.94■■□□□ 1.1
MSH5O43196 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.94■■□□□ 1.1
MSH5O43196 AC003075.1-206ENST00000448664 541 ntTSL 3 BASIC21.94■■□□□ 1.1
MSH5O43196 CRB3P1-201ENST00000449338 276 ntBASIC21.94■■□□□ 1.1
MSH5O43196 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.94■■□□□ 1.1
MSH5O43196 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC21.94■■□□□ 1.1
MSH5O43196 IGHV3-62-201ENST00000520057 340 ntBASIC21.94■■□□□ 1.1
MSH5O43196 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MSH5O43196 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC21.94■■□□□ 1.1
MSH5O43196 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.94■■□□□ 1.1
MSH5O43196 AC116407.2-201ENST00000613639 860 ntBASIC21.94■■□□□ 1.1
MSH5O43196 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC21.94■■□□□ 1.1
MSH5O43196 AC091948.2-201ENST00000636510 279 ntBASIC21.94■■□□□ 1.1
MSH5O43196 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MSH5O43196 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms