RNA–Protein interactions for RNA: ENST00000563887.1

AL035425.2-201, humanhuman

APPRIS P1 TSL 4 BASIC

Gene AL035425.2, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL035425.2-201ENST00000563887 AEBP2Q6ZN18 517 aaPredicted RBP29.47■■■□□ 2.31
AL035425.2-201ENST00000563887 CHIC1Q5VXU3 224 aa27.91■■■□□ 2.06
AL035425.2-201ENST00000563887 SENP3Q9H4L4 574 aaPredicted RBP25.14■■□□□ 1.62
AL035425.2-201ENST00000563887 PHF23Q9BUL5 403 aaPredicted RBP24.83■■□□□ 1.57
AL035425.2-201ENST00000563887 FOXD1Q16676 465 aa23.46■■□□□ 1.35
AL035425.2-201ENST00000563887 PLPPR3Q6T4P5 718 aa22.26■■□□□ 1.15
AL035425.2-201ENST00000563887 MSH5O43196 834 aa21.96■■□□□ 1.11
AL035425.2-201ENST00000563887 PIAS4Q8N2W9 510 aaPredicted RBP21.91■■□□□ 1.1
AL035425.2-201ENST00000563887 PPP6R1Q9UPN7 881 aa21.89■■□□□ 1.09
AL035425.2-201ENST00000563887 ADRA2BP18089 450 aa21.82■■□□□ 1.08
AL035425.2-201ENST00000563887 POTEDQ86YR6 584 aa21.58■■□□□ 1.05
AL035425.2-201ENST00000563887 MAPK8IP2Q13387 824 aaPredicted RBP20.08■□□□□ 0.81
AL035425.2-201ENST00000563887 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
AL035425.2-201ENST00000563887 DMRT2Q9Y5R5 561 aa19.92■□□□□ 0.78
AL035425.2-201ENST00000563887 PPP4R3CPQ6ZMV5 832 aa19.53■□□□□ 0.72
AL035425.2-201ENST00000563887 DCAF8L1A6NGE4 600 aa19.16■□□□□ 0.66
AL035425.2-201ENST00000563887 HOXD11P31277 338 aaPredicted RBP19.16■□□□□ 0.66
AL035425.2-201ENST00000563887 CNKSR2Q8WXI2 1034 aa19.16■□□□□ 0.66
AL035425.2-201ENST00000563887 RNF216Q9NWF9 866 aaPredicted RBP19■□□□□ 0.63
AL035425.2-201ENST00000563887 CACNB1Q02641 598 aaPredicted RBP18.93■□□□□ 0.62
AL035425.2-201ENST00000563887 NCBP3Q53F19 620 aaKnown RBP18.74■□□□□ 0.59
AL035425.2-201ENST00000563887 RNF39Q9H2S5 420 aa18.73■□□□□ 0.59
AL035425.2-201ENST00000563887 NPM3O75607 178 aaKnown RBP18.47■□□□□ 0.55
AL035425.2-201ENST00000563887 DNAJC5BQ9UF47 199 aa18.47■□□□□ 0.55
AL035425.2-201ENST00000563887 C1QBPQ07021 282 aaKnown RBP18.45■□□□□ 0.54
AL035425.2-201ENST00000563887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.29■□□□□ 0.52
AL035425.2-201ENST00000563887 KCNA4P22459 653 aa18.07■□□□□ 0.48
AL035425.2-201ENST00000563887 U3KPZ7 1027 aaPredicted RBP17.88■□□□□ 0.45
AL035425.2-201ENST00000563887 SLC4A2P04920 1241 aa17.66■□□□□ 0.42
AL035425.2-201ENST00000563887 SPINK5Q9NQ38 1064 aaPredicted RBP17.66■□□□□ 0.42
AL035425.2-201ENST00000563887 CAPN15O75808 1086 aa17.64■□□□□ 0.41
AL035425.2-201ENST00000563887 DSG3P32926 999 aa17.53■□□□□ 0.4
AL035425.2-201ENST00000563887 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
AL035425.2-201ENST00000563887 APLP2Q06481 763 aa17.35■□□□□ 0.37
AL035425.2-201ENST00000563887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.33■□□□□ 0.36
AL035425.2-201ENST00000563887 HNRNPUL2Q1KMD3 747 aaKnown RBP17.33■□□□□ 0.36
AL035425.2-201ENST00000563887 ZNF219Q9P2Y4 722 aaPredicted RBP17.26■□□□□ 0.35
AL035425.2-201ENST00000563887 ABCB7O75027 752 aa17.24■□□□□ 0.35
AL035425.2-201ENST00000563887 SAMD1Q6SPF0 538 aaPredicted RBP17.23■□□□□ 0.35
AL035425.2-201ENST00000563887 MYCNP04198 464 aaPredicted RBP17.08■□□□□ 0.32
AL035425.2-201ENST00000563887 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
AL035425.2-201ENST00000563887 POTEHQ6S545 545 aa16.9■□□□□ 0.3
AL035425.2-201ENST00000563887 POLA2Q14181 598 aa16.86■□□□□ 0.29
AL035425.2-201ENST00000563887 FOXD4L1Q9NU39 408 aa16.86■□□□□ 0.29
AL035425.2-201ENST00000563887 RBM42Q9BTD8 480 aaKnown RBP16.72■□□□□ 0.27
AL035425.2-201ENST00000563887 ATF5Q9Y2D1 282 aaPredicted RBP16.72■□□□□ 0.27
AL035425.2-201ENST00000563887 ZBTB22O15209 634 aa16.6■□□□□ 0.25
AL035425.2-201ENST00000563887 ZBTB12Q9Y330 459 aaPredicted RBP16.46■□□□□ 0.23
AL035425.2-201ENST00000563887 CHRDL2Q6WN34 429 aa16.39■□□□□ 0.21
AL035425.2-201ENST00000563887 ATXN8OSP0DMR3 200 aa16.33■□□□□ 0.2
AL035425.2-201ENST00000563887 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
AL035425.2-201ENST00000563887 OSCARQ8IYS5 282 aa16.3■□□□□ 0.2
AL035425.2-201ENST00000563887 REM2Q8IYK8 340 aaPredicted RBP16.18■□□□□ 0.18
AL035425.2-201ENST00000563887 FBLN2P98095 1184 aa16.06■□□□□ 0.16
AL035425.2-201ENST00000563887 PITPNM1O00562 1244 aa16.01■□□□□ 0.15
AL035425.2-201ENST00000563887 PIP4P2Q8N4L2 257 aa15.99■□□□□ 0.15
AL035425.2-201ENST00000563887 SPDYE2BA6NHP3 402 aa15.96■□□□□ 0.15
AL035425.2-201ENST00000563887 SPDYE6P0CI01 402 aa15.96■□□□□ 0.15
AL035425.2-201ENST00000563887 SPDYE2Q495Y8 402 aa15.96■□□□□ 0.15
AL035425.2-201ENST00000563887 MKRN4PQ13434 485 aaPredicted RBP15.93■□□□□ 0.14
AL035425.2-201ENST00000563887 FXR2P51116 673 aaKnown RBP eCLIP15.87■□□□□ 0.13
AL035425.2-201ENST00000563887 SP7Q8TDD2 431 aaPredicted RBP15.8■□□□□ 0.12
AL035425.2-201ENST00000563887 ZNF692Q9BU19 519 aaPredicted RBP15.78■□□□□ 0.12
AL035425.2-201ENST00000563887 CSRNP3Q8WYN3 585 aa15.77■□□□□ 0.12
AL035425.2-201ENST00000563887 HAX1O00165 279 aa15.75■□□□□ 0.11
AL035425.2-201ENST00000563887 CLEC11AQ9Y240 323 aa15.73■□□□□ 0.11
AL035425.2-201ENST00000563887 SSUH2Q9Y2M2 353 aa15.73■□□□□ 0.11
AL035425.2-201ENST00000563887 SPDYE1Q8NFV5 336 aaPredicted RBP15.71■□□□□ 0.11
AL035425.2-201ENST00000563887 PRKAR2AP13861 404 aaKnown RBP15.61■□□□□ 0.09
AL035425.2-201ENST00000563887 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
AL035425.2-201ENST00000563887 EHMT2Q96KQ7 1210 aa15.55■□□□□ 0.08
AL035425.2-201ENST00000563887 EVX2Q03828 476 aa15.54■□□□□ 0.08
AL035425.2-201ENST00000563887 PRR29P0C7W0 189 aa15.44■□□□□ 0.06
AL035425.2-201ENST00000563887 CHADLQ6NUI6 762 aa15.43■□□□□ 0.06
AL035425.2-201ENST00000563887 C19orf67A6NJJ6 358 aa15.37■□□□□ 0.05
AL035425.2-201ENST00000563887 GABBR2O75899 941 aa15.18■□□□□ 0.02
AL035425.2-201ENST00000563887 FARP1Q9Y4F1 1045 aaPredicted RBP15.17■□□□□ 0.02
AL035425.2-201ENST00000563887 SPDYE4A6NLX3 237 aa15.15■□□□□ 0.02
AL035425.2-201ENST00000563887 CD44P16070 742 aaKnown RBP15.1■□□□□ 0.01
AL035425.2-201ENST00000563887 STAG3Q9UJ98 1225 aa15.09■□□□□ 0.01
AL035425.2-201ENST00000563887 CREBZFQ9NS37 354 aa15.02■□□□□ -0
AL035425.2-201ENST00000563887 ZRANB1Q9UGI0 708 aa14.89□□□□□ -0.03
AL035425.2-201ENST00000563887 CLCN6P51797 869 aa14.88□□□□□ -0.03
AL035425.2-201ENST00000563887 POTEIP0CG38 1075 aa14.85□□□□□ -0.03
AL035425.2-201ENST00000563887 LHX8Q68G74 356 aa14.84□□□□□ -0.03
AL035425.2-201ENST00000563887 ZNF579Q8NAF0 562 aaKnown RBP14.84□□□□□ -0.03
AL035425.2-201ENST00000563887 DCBLD2Q96PD2 775 aa14.77□□□□□ -0.05
AL035425.2-201ENST00000563887 NPM1P06748 294 aaKnown RBP eCLIP14.75□□□□□ -0.05
AL035425.2-201ENST00000563887 MNX1P50219 401 aaPredicted RBP14.75□□□□□ -0.05
AL035425.2-201ENST00000563887 PAK3O75914 559 aaPredicted RBP14.74□□□□□ -0.05
AL035425.2-201ENST00000563887 PROM2Q8N271 834 aa14.72□□□□□ -0.05
AL035425.2-201ENST00000563887 GALR2O43603 387 aaPredicted RBP14.7□□□□□ -0.06
AL035425.2-201ENST00000563887 PHF12Q96QT6 1004 aa14.68□□□□□ -0.06
AL035425.2-201ENST00000563887 TSPYL2Q9H2G4 693 aaPredicted RBP14.51□□□□□ -0.09
AL035425.2-201ENST00000563887 MIER1Q8N108 512 aa14.49□□□□□ -0.09
AL035425.2-201ENST00000563887 MS4A3Q96HJ5 214 aa14.46□□□□□ -0.09
AL035425.2-201ENST00000563887 PLEKHG5O94827 1062 aa14.45□□□□□ -0.1
AL035425.2-201ENST00000563887 PELP1Q8IZL8 1130 aaKnown RBP14.42□□□□□ -0.1
AL035425.2-201ENST00000563887 CCDC61Q9Y6R9 512 aa14.41□□□□□ -0.1
AL035425.2-201ENST00000563887 POTEB2H3BUK9 544 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms